Gene description for Cib1
Gene name calcium and integrin binding 1 (calmyrin)
Gene symbol Cib1
Other names/aliases Cib
Sip2-28
Species Rattus norvegicus
 Database cross references - Cib1
ExoCarta ExoCarta_81823
Entrez Gene 81823
UniProt Q9R010  
 Cib1 identified in exosomes derived from the following tissue/cell type
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
 Gene ontology annotations for Cib1
Molecular Function
    protein serine/threonine kinase inhibitor activity GO:0030291 ISO
    protein anchor GO:0043495 ISO
    Ras GTPase binding GO:0017016 ISO
    calcium ion binding GO:0005509 ISS
    calcium-dependent protein kinase inhibitor activity GO:0008427 ISO
    ion channel binding GO:0044325 ISO
    protein binding GO:0005515 IPI
Biological Process
    spermatid development GO:0007286 ISS
    positive regulation of cell proliferation GO:0008284 ISS
    negative regulation of protein kinase activity GO:0006469 ISO
    negative regulation of megakaryocyte differentiation GO:0045653 ISS
    cellular response to growth factor stimulus GO:0071363 ISS
    positive regulation of protein phosphorylation GO:0001934 ISS
    regulation of cell division GO:0051302 ISS
    positive regulation of cell-matrix adhesion GO:0001954 ISS
    positive regulation of establishment of protein localization to plasma membrane GO:0090004 ISO
    positive regulation of protein serine/threonine kinase activity GO:0071902 ISS
    negative regulation of neuron projection development GO:0010977 ISS
    negative regulation of microtubule depolymerization GO:0007026 ISS
    positive regulation of protein targeting to membrane GO:0090314 ISS
    positive regulation of cell migration involved in sprouting angiogenesis GO:0090050 ISS
    response to ischemia GO:0002931 ISS
    positive regulation of calcineurin-NFAT signaling cascade GO:0070886 ISO
    positive regulation of male germ cell proliferation GO:2000256 ISS
    positive regulation of metalloenzyme activity GO:0048554 ISS
    cellular response to tumor necrosis factor GO:0071356 ISS
    positive regulation of substrate adhesion-dependent cell spreading GO:1900026 ISS
    positive regulation of NF-kappaB transcription factor activity GO:0051092 ISS
    negative regulation of apoptotic process GO:0043066 ISS
    cellular response to nerve growth factor stimulus GO:1990090 ISS
    angiogenesis GO:0001525 IEA
    negative regulation of protein kinase B signaling GO:0051898 ISS
    cell division GO:0051301 IEA
    positive regulation of cell migration GO:0030335 ISS
    cell adhesion GO:0007155 IEA
    platelet formation GO:0030220 ISS
    cellular response to DNA damage stimulus GO:0006974 ISS
    negative regulation of cell proliferation GO:0008285 ISS
    positive regulation of cell adhesion mediated by integrin GO:0033630 ISS
    thrombopoietin-mediated signaling pathway GO:0038163 ISS
    cytoplasmic microtubule organization GO:0031122 ISS
    endomitotic cell cycle GO:0007113 ISS
    negative regulation of protein phosphorylation GO:0001933 ISS
    negative regulation of protein serine/threonine kinase activity GO:0071901 ISO
    regulation of cell proliferation GO:0042127 ISS
    positive regulation of cell growth GO:0030307 ISS
    apoptotic process GO:0006915 ISS
    positive regulation of ERK1 and ERK2 cascade GO:0070374 ISS
Subcellular Localization
    cell periphery GO:0071944 ISS
    neuron projection GO:0043005 ISS
    apical plasma membrane GO:0016324 IEA
    lamellipodium GO:0030027 ISS
    membrane GO:0016020 ISS
    sarcolemma GO:0042383 ISO
    plasma membrane GO:0005886 ISS
    extracellular exosome GO:0070062 ISO
    perinuclear region of cytoplasm GO:0048471 ISS
    cytoplasm GO:0005737 ISS
    filopodium tip GO:0032433 ISS
    nucleoplasm GO:0005654 ISS
    vesicle GO:0031982 ISO
    growth cone GO:0030426 ISS
    neuronal cell body GO:0043025 ISS
    endoplasmic reticulum GO:0005783 ISS
    centrosome GO:0005813 ISS
    nucleus GO:0005634 ISS
    ruffle membrane GO:0032587 IEA
 Experiment description of studies that identified Cib1 in exosomes
1
Experiment ID 90
ISEV standards
EM
EV Biophysical techniques
HSC70|HSP90|TSG101
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
2
Experiment ID 94
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
3
Experiment ID 95
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D7 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.25 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
4
Experiment ID 96
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
5
Experiment ID 97
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
6
Experiment ID 98
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D7 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.25 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
 Protein-protein interactions for Cib1
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Plk2  
Reconstituted Complex Rattus norvegicus
Two-hybrid Rattus norvegicus
2 Plk3  
Reconstituted Complex Rattus norvegicus
Two-hybrid Rattus norvegicus
View the network image/svg+xml
 Pathways in which Cib1 is involved
No pathways found





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