Gene description for B2m
Gene name beta-2 microglobulin
Gene symbol B2m
Other names/aliases -
Species Rattus norvegicus
 Database cross references - B2m
ExoCarta ExoCarta_24223
Vesiclepedia VP_24223
Entrez Gene 24223
UniProt P07151  
 B2m identified in sEVs derived from the following tissue/cell type
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
 Gene ontology annotations for B2m
Molecular Function
    structural molecule activity GO:0005198 IEA
    structural molecule activity GO:0005198 ISO
    MHC class II protein complex binding GO:0023026 IBA
    peptide antigen binding GO:0042605 IBA
    identical protein binding GO:0042802 ISO
    protein homodimerization activity GO:0042803 IEA
    protein homodimerization activity GO:0042803 ISO
Biological Process
    T cell mediated cytotoxicity GO:0001913 ISO
    positive regulation of T cell mediated cytotoxicity GO:0001916 ISO
    response to molecule of bacterial origin GO:0002237 ISO
    antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent GO:0002481 ISO
    peptide antigen assembly with MHC class I protein complex GO:0002502 IEA
    peptide antigen assembly with MHC class I protein complex GO:0002502 ISO
    peptide antigen assembly with MHC class II protein complex GO:0002503 IBA
    positive regulation of T cell cytokine production GO:0002726 IEA
    positive regulation of T cell cytokine production GO:0002726 ISO
    regulation of membrane depolarization GO:0003254 ISO
    iron ion transport GO:0006826 ISO
    intracellular iron ion homeostasis GO:0006879 IEA
    intracellular iron ion homeostasis GO:0006879 ISO
    immune response GO:0006955 IEA
    sensory perception of smell GO:0007608 ISO
    learning or memory GO:0007611 IEA
    learning or memory GO:0007611 ISO
    response to xenobiotic stimulus GO:0009410 IEP
    negative regulation of neuron projection development GO:0010977 ISO
    antigen processing and presentation of endogenous peptide antigen via MHC class I GO:0019885 IEA
    antigen processing and presentation of endogenous peptide antigen via MHC class I GO:0019885 ISO
    antigen processing and presentation of exogenous peptide antigen via MHC class II GO:0019886 IBA
    T cell differentiation in thymus GO:0033077 ISO
    regulation of iron ion transport GO:0034756 IEA
    regulation of iron ion transport GO:0034756 ISO
    protein refolding GO:0042026 ISO
    innate immune response GO:0045087 ISO
    regulation of erythrocyte differentiation GO:0045646 ISO
    response to cadmium ion GO:0046686 IEP
    positive regulation of receptor-mediated endocytosis GO:0048260 IEA
    positive regulation of receptor-mediated endocytosis GO:0048260 ISO
    negative regulation of epithelial cell proliferation GO:0050680 IEA
    negative regulation of epithelial cell proliferation GO:0050680 ISO
    negative regulation of neurogenesis GO:0050768 IEA
    negative regulation of neurogenesis GO:0050768 ISO
    positive regulation of immune response GO:0050778 IBA
    positive regulation of T cell activation GO:0050870 IBA
    protein homotetramerization GO:0051289 IEA
    protein homotetramerization GO:0051289 ISO
    multicellular organismal-level iron ion homeostasis GO:0060586 ISO
    antimicrobial humoral immune response mediated by antimicrobial peptide GO:0061844 ISO
    cellular response to lipopolysaccharide GO:0071222 ISO
    cellular response to iron ion GO:0071281 IEA
    cellular response to iron ion GO:0071281 ISO
    cellular response to iron(III) ion GO:0071283 ISO
    cellular response to nicotine GO:0071316 IEA
    cellular response to nicotine GO:0071316 ISO
    amyloid fibril formation GO:1990000 IEA
    amyloid fibril formation GO:1990000 ISO
    positive regulation of cellular senescence GO:2000774 IEA
    positive regulation of cellular senescence GO:2000774 ISO
    negative regulation of forebrain neuron differentiation GO:2000978 IEA
    negative regulation of forebrain neuron differentiation GO:2000978 ISO
Subcellular Localization
    extracellular region GO:0005576 IEA
    extracellular space GO:0005615 IDA
    extracellular space GO:0005615 ISO
    lysosomal membrane GO:0005765 IBA
    Golgi apparatus GO:0005794 IEA
    Golgi apparatus GO:0005794 ISO
    cytosol GO:0005829 IEA
    cytosol GO:0005829 ISO
    plasma membrane GO:0005886 ISO
    external side of plasma membrane GO:0009897 ISO
    late endosome membrane GO:0031902 IBA
    MHC class I protein complex GO:0042612 IEA
    MHC class II protein complex GO:0042613 IBA
    MHC class I peptide loading complex GO:0042824 IEA
    MHC class I peptide loading complex GO:0042824 ISO
    HFE-transferrin receptor complex GO:1990712 IEA
    HFE-transferrin receptor complex GO:1990712 ISO
 Experiment description of studies that identified B2m in sEVs
1
Experiment ID 90
MISEV standards
EM
Biophysical techniques
HSC70|HSP90|TSG101|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E"
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
2
Experiment ID 94
MISEV standards
EM
Biophysical techniques
TSG101|HSP90|HSC70|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
3
Experiment ID 96
MISEV standards
EM
Biophysical techniques
TSG101|HSP90|HSC70|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
4
Experiment ID 97
MISEV standards
EM
Biophysical techniques
TSG101|HSP90|HSC70|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
 Protein-protein interactions for B2m
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Vcp 116643
Co-fractionation Rattus norvegicus
2 Ubc  
Affinity Capture-Western Rattus norvegicus
View the network image/svg+xml



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