Gene description for Tfrc
Gene name transferrin receptor
Gene symbol Tfrc
Other names/aliases Trfr
Species Rattus norvegicus
 Database cross references - Tfrc
ExoCarta ExoCarta_64678
Vesiclepedia VP_64678
Entrez Gene 64678
 Tfrc identified in sEVs derived from the following tissue/cell type
Pancreatic cancer cells 20124479    
Pancreatic cancer cells 20124479    
 Gene ontology annotations for Tfrc
Molecular Function
    double-stranded RNA binding GO:0003725 ISO
    transferrin receptor activity GO:0004998 IDA
    transferrin receptor activity GO:0004998 IEA
    transferrin receptor activity GO:0004998 ISO
    transferrin receptor activity GO:0004998 TAS
    protein binding GO:0005515 IPI
    protein kinase binding GO:0019901 ISO
    Hsp70 protein binding GO:0030544 IPI
    identical protein binding GO:0042802 ISO
    protein homodimerization activity GO:0042803 ISO
    protein-containing complex binding GO:0044877 ISO
    protein-folding chaperone binding GO:0051087 IPI
Biological Process
    regulation of cell growth GO:0001558 ISO
    response to hypoxia GO:0001666 IEP
    positive regulation of protein phosphorylation GO:0001934 ISO
    iron ion transport GO:0006826 IBA
    iron ion transport GO:0006826 ISO
    intracellular iron ion homeostasis GO:0006879 IBA
    intracellular iron ion homeostasis GO:0006879 IEA
    intracellular iron ion homeostasis GO:0006879 ISO
    acute-phase response GO:0006953 IEP
    response to nutrient GO:0007584 IEP
    response to iron ion GO:0010039 IEP
    response to manganese ion GO:0010042 IEP
    positive regulation of gene expression GO:0010628 ISO
    negative regulation of mitochondrial fusion GO:0010637 ISO
    osteoclast differentiation GO:0030316 ISO
    positive regulation of B cell proliferation GO:0030890 ISO
    positive regulation of B cell proliferation GO:0030890 ISS
    positive regulation of protein-containing complex assembly GO:0031334 ISO
    receptor internalization GO:0031623 IEA
    receptor internalization GO:0031623 ISO
    receptor internalization GO:0031623 ISS
    response to retinoic acid GO:0032526 IEP
    positive regulation of peptidyl-serine phosphorylation GO:0033138 ISO
    transferrin transport GO:0033572 IEA
    transferrin transport GO:0033572 ISO
    intracellular signal transduction GO:0035556 ISO
    positive regulation of T cell proliferation GO:0042102 ISO
    positive regulation of T cell proliferation GO:0042102 ISS
    regulation of cell population proliferation GO:0042127 ISO
    negative regulation of apoptotic process GO:0043066 ISO
    positive regulation of canonical NF-kappaB signal transduction GO:0043123 ISO
    positive regulation of bone resorption GO:0045780 ISO
    positive regulation of isotype switching GO:0045830 ISO
    positive regulation of isotype switching GO:0045830 ISS
    response to copper ion GO:0046688 IEP
    positive regulation of NF-kappaB transcription factor activity GO:0051092 ISO
    multicellular organismal-level iron ion homeostasis GO:0060586 ISO
    cellular response to xenobiotic stimulus GO:0071466 ISO
    regulation of postsynaptic membrane neurotransmitter receptor levels GO:0099072 ISO
    positive regulation of protein localization to nucleus GO:1900182 ISO
    cellular response to leukemia inhibitory factor GO:1990830 ISO
Subcellular Localization
    extracellular region GO:0005576 ISO
    extracellular space GO:0005615 IDA
    endosome GO:0005768 ISO
    early endosome GO:0005769 ISO
    plasma membrane GO:0005886 IDA
    plasma membrane GO:0005886 IEA
    plasma membrane GO:0005886 ISO
    plasma membrane GO:0005886 ISO
    clathrin-coated pit GO:0005905 ISO
    external side of plasma membrane GO:0009897 IBA
    external side of plasma membrane GO:0009897 ISO
    cell surface GO:0009986 IDA
    cell surface GO:0009986 ISO
    endosome membrane GO:0010008 ISO
    membrane GO:0016020 ISO
    basolateral plasma membrane GO:0016323 ISO
    cytoplasmic vesicle GO:0031410 ISO
    melanosome GO:0042470 IEA
    intracellular membrane-bounded organelle GO:0043231 ISO
    perinuclear region of cytoplasm GO:0048471 ISO
    recycling endosome GO:0055037 ISO
    recycling endosome membrane GO:0055038 IDA
    extracellular exosome GO:0070062 ISO
    postsynapse GO:0098794 ISO
    postsynaptic recycling endosome membrane GO:0098944 IDA
    glutamatergic synapse GO:0098978 IDA
    HFE-transferrin receptor complex GO:1990712 ISO
 Experiment description of studies that identified Tfrc in sEVs
1
Experiment ID 93
MISEV standards
EM
Biophysical techniques
HSP70|GAPDH|CD9|CD151
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Western blotting
Mass spectrometry [MALDI TOF]
PubMed ID 20124479    
Organism Rattus norvegicus
Experiment description Cell surface tetraspanin Tspan8 contributes to molecular pathways of exosome-induced endothelial cell activation.
Authors "Nazarenko I, Rana S, Baumann A, McAlear J, Hellwig A, Trendelenburg M, Lochnit G, Preissner KT, Zoller M."
Journal name CR
Publication year 2010
Sample Pancreatic cancer cells
Sample name AS-Tspan8
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Flotation density 1.14-1.17 g/mL
Molecules identified in the study Protein
mRNA
Methods used in the study RT-PCR
Western blotting
2
Experiment ID 92
MISEV standards
EM
Biophysical techniques
HSP70|GAPDH|CD9|CD151
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Western blotting
PubMed ID 20124479    
Organism Rattus norvegicus
Experiment description Cell surface tetraspanin Tspan8 contributes to molecular pathways of exosome-induced endothelial cell activation.
Authors "Nazarenko I, Rana S, Baumann A, McAlear J, Hellwig A, Trendelenburg M, Lochnit G, Preissner KT, Zoller M."
Journal name CR
Publication year 2010
Sample Pancreatic cancer cells
Sample name AS
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Flotation density 1.14-1.17 g/mL
Molecules identified in the study Protein
mRNA
Methods used in the study RT-PCR
Western blotting
RatRef-12 Microarray
FACS
Mass spectrometry [MALDI TOF]
 Protein-protein interactions for Tfrc
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 OPTN 10133
Affinity Capture-Western Homo sapiens
2 Arf6 79121
Reconstituted Complex Rattus norvegicus
3 Arfgap1  
Reconstituted Complex Rattus norvegicus
4 Ap2b1 140670
Reconstituted Complex Rattus norvegicus
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