Gene description for DEAF1
Gene name DEAF1 transcription factor
Gene symbol DEAF1
Other names/aliases MRD24
NUDR
SPN
ZMYND5
Species Homo sapiens
 Database cross references - DEAF1
ExoCarta ExoCarta_10522
Vesiclepedia VP_10522
Entrez Gene 10522
HGNC 14677
MIM 602635
UniProt O75398  
 DEAF1 identified in sEVs derived from the following tissue/cell type
Hepatocellular carcinoma cells 26054723    
 Gene ontology annotations for DEAF1
Molecular Function
    RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000977 IDA
    DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981 IBA
    DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981 ISA
    DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001227 IDA
    protein binding GO:0005515 IPI
    metal ion binding GO:0046872 IEA
Biological Process
    negative regulation of transcription by RNA polymerase II GO:0000122 IDA
    neural tube closure GO:0001843 ISS
    regulation of transcription by RNA polymerase II GO:0006357 IBA
    transcription by RNA polymerase II GO:0006366 TAS
    germ cell development GO:0007281 TAS
    anatomical structure morphogenesis GO:0009653 TAS
    regulation of mammary gland epithelial cell proliferation GO:0033599 IDA
    negative regulation of DNA-templated transcription GO:0045892 IDA
    positive regulation of DNA-templated transcription GO:0045893 IDA
    embryonic skeletal system development GO:0048706 ISS
Subcellular Localization
    chromatin GO:0000785 ISA
    fibrillar center GO:0001650 IDA
    extracellular region GO:0005576 IEA
    nucleus GO:0005634 IBA
    nucleus GO:0005634 IDA
    nucleoplasm GO:0005654 IDA
    cytoplasm GO:0005737 IDA
    cytoplasm GO:0005737 IEA
 Experiment description of studies that identified DEAF1 in sEVs
1
Experiment ID 235
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
 Protein-protein interactions for DEAF1
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 FHL1 2273
Two-hybrid Homo sapiens
2 LMO4  
Two-hybrid Homo sapiens
3 GSK3B 2932
Biochemical Activity Homo sapiens
Affinity Capture-Western Homo sapiens
4 PELI2 57161
Two-hybrid Homo sapiens
5 KLF16  
Proximity Label-MS Homo sapiens
6 PIN1 5300
Two-hybrid Homo sapiens
7 PPP1CA 5499
Two-hybrid Homo sapiens
8 RAD23B 5887
Two-hybrid Homo sapiens
9 CDC37 11140
Two-hybrid Homo sapiens
10 BSPRY 54836
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
11 HRAS 3265
Two-hybrid Homo sapiens
12 HIST1H4A 8359
Affinity Capture-MS Homo sapiens
13 HRSP12 10247
Two-hybrid Homo sapiens
14 CDKN1A  
Two-hybrid Homo sapiens
15 CREB1  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
16 DDX58 23586
Affinity Capture-RNA Homo sapiens
17 GSK3A 2931
Biochemical Activity Homo sapiens
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
18 PPP1CC 5501
Two-hybrid Homo sapiens
19 IRF7  
Affinity Capture-Western Homo sapiens
20 PELI1 57162
Affinity Capture-Western Homo sapiens
21 KLF8  
Proximity Label-MS Homo sapiens
22 ASCC2 84164
Two-hybrid Homo sapiens
23 CEP76  
Two-hybrid Homo sapiens
24 FHL2 2274
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
25 CEBPA  
Proximity Label-MS Homo sapiens
26 IRF3 3661
Affinity Capture-Western Homo sapiens
27 AIMP2 7965
Two-hybrid Homo sapiens
28 CDKN2A 1029
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
29 TK1 7083
Two-hybrid Homo sapiens
View the network image/svg+xml
 Pathways in which DEAF1 is involved
No pathways found





Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here