Gene description for Dcaf13
Gene name DDB1 and CUL4 associated factor 13
Gene symbol Dcaf13
Other names/aliases Gm83
Wdsof1
Species Mus musculus
 Database cross references - Dcaf13
ExoCarta ExoCarta_223499
Vesiclepedia VP_223499
Entrez Gene 223499
UniProt Q6PAC3  
 Dcaf13 identified in sEVs derived from the following tissue/cell type
Mast cells 17486113    
 Gene ontology annotations for Dcaf13
Molecular Function
    protein binding GO:0005515 IPI
    nuclear estrogen receptor binding GO:0030331 IEA
    nuclear estrogen receptor binding GO:0030331 ISO
    ubiquitin-like ligase-substrate adaptor activity GO:1990756 IDA
    ubiquitin-like ligase-substrate adaptor activity GO:1990756 ISO
Biological Process
    maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000462 IBA
    oocyte growth GO:0001555 IDA
    rRNA processing GO:0006364 IDA
    spindle assembly involved in female meiosis GO:0007056 IEA
    spindle assembly involved in female meiosis GO:0007056 ISO
    protein ubiquitination GO:0016567 IEA
    proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043161 IEA
    proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043161 ISO
    epigenetic programming in the zygotic pronuclei GO:0044725 IEA
    epigenetic programming in the zygotic pronuclei GO:0044725 ISO
    decidualization GO:0046697 IDA
    decidualization GO:0046697 ISO
Subcellular Localization
    nucleoplasm GO:0005654 IEA
    nucleoplasm GO:0005654 ISO
    nucleolus GO:0005730 IBA
    nucleolus GO:0005730 IDA
    nucleolus GO:0005730 ISO
    centrosome GO:0005813 IEA
    centrosome GO:0005813 ISO
    cytosol GO:0005829 IEA
    cytosol GO:0005829 ISO
    cell junction GO:0030054 IEA
    cell junction GO:0030054 ISO
    small-subunit processome GO:0032040 IBA
    Cul4-RING E3 ubiquitin ligase complex GO:0080008 IDA
    Cul4-RING E3 ubiquitin ligase complex GO:0080008 ISO
    Cul4-RING E3 ubiquitin ligase complex GO:0080008 ISS
    ribonucleoprotein complex GO:1990904 IEA
 Experiment description of studies that identified Dcaf13 in sEVs
1
Experiment ID 15
MISEV standards
✔ Biophysical techniques
✔ Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule mrna
Identification method Microarray
PubMed ID 17486113    
Organism Mus musculus
Homo sapiens
Experiment description Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.
Authors "Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO"
Journal name NCB
Publication year 2007
Sample Mast cells
Sample name MC9
Bone marrow-derived mast cells
HMC-1
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.11-1.21 g/mL
Molecules identified in the study Protein
mRNA
miRNA
Methods used in the study Mass spectrometry [MALDI TOF]
Western blotting
Microarray
miRCURY LNA Array
 Protein-protein interactions for Dcaf13
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 D2Wsu81e  
Co-fractionation Mus musculus
2 Ctps 51797
Co-fractionation Mus musculus
3 Cebpz  
Co-fractionation Mus musculus
4 Nsun2 28114
Co-fractionation Mus musculus
5 Trmt1  
Co-fractionation Mus musculus
6 Impdh1  
Co-fractionation Mus musculus
7 RBM22 55696
Two-hybrid Homo sapiens
8 Pdcd11  
Co-fractionation Mus musculus
9 Esf1  
Co-fractionation Mus musculus
10 Uck1  
Co-fractionation Mus musculus
11 Pwp2  
Co-fractionation Mus musculus
12 Pinx1  
Co-fractionation Mus musculus
13 Rcl1  
Co-fractionation Mus musculus
14 Ddx27  
Co-fractionation Mus musculus
15 Pfn1 18643
Two-hybrid Mus musculus
16 Ttc4  
Co-fractionation Mus musculus
17 Imp3  
Co-fractionation Mus musculus
18 Gnl2  
Co-fractionation Mus musculus
19 Nop14  
Co-fractionation Mus musculus
20 Gnl3  
Co-fractionation Mus musculus
21 Ranbp6  
Co-fractionation Mus musculus
22 Wdr43  
Co-fractionation Mus musculus
23 Abcf2 27407
Co-fractionation Mus musculus
24 Lsg1  
Co-fractionation Mus musculus
25 Gtpbp4  
Co-fractionation Mus musculus
26 Sdad1  
Co-fractionation Mus musculus
27 Eed  
Affinity Capture-MS Mus musculus
28 Surf6  
Co-fractionation Mus musculus
29 Hgh1 59053
Co-fractionation Mus musculus
30 Utp11l  
Co-fractionation Mus musculus
31 Aatf  
Co-fractionation Mus musculus
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