Gene description for RYR3
Gene name ryanodine receptor 3
Gene symbol RYR3
Other names/aliases RYR-3
Species Homo sapiens
 Database cross references - RYR3
ExoCarta ExoCarta_6263
Vesiclepedia VP_6263
Entrez Gene 6263
HGNC 10485
MIM 180903
UniProt Q15413  
 RYR3 identified in sEVs derived from the following tissue/cell type
Hepatocytes 26054723    
 Gene ontology annotations for RYR3
Molecular Function
    ryanodine-sensitive calcium-release channel activity GO:0005219 IBA
    ryanodine-sensitive calcium-release channel activity GO:0005219 ISS
    ryanodine-sensitive calcium-release channel activity GO:0005219 TAS
    calcium ion binding GO:0005509 IEA
    calmodulin binding GO:0005516 IEA
    intracellularly gated calcium channel activity GO:0015278 IMP
    calcium-induced calcium release activity GO:0048763 ISS
Biological Process
    calcium ion transport GO:0006816 IMP
    intracellular calcium ion homeostasis GO:0006874 IEA
    striated muscle contraction GO:0006941 IBA
    release of sequestered calcium ion into cytosol by sarcoplasmic reticulum GO:0014808 IBA
    calcium-mediated signaling GO:0019722 IEA
    release of sequestered calcium ion into cytosol GO:0051209 ISS
    protein homotetramerization GO:0051289 ISS
    calcium ion transmembrane transport GO:0070588 ISS
    cellular response to calcium ion GO:0071277 ISS
    cellular response to magnesium ion GO:0071286 ISS
    cellular response to caffeine GO:0071313 ISS
    cellular response to ATP GO:0071318 ISS
Subcellular Localization
    smooth endoplasmic reticulum GO:0005790 IBA
    membrane GO:0016020 ISS
    Z disc GO:0030018 IBA
    sarcoplasmic reticulum membrane GO:0033017 IBA
    sarcoplasmic reticulum membrane GO:0033017 ISS
    sarcoplasmic reticulum membrane GO:0033017 ISS
    sarcoplasmic reticulum membrane GO:0033017 TAS
    calcium channel complex GO:0034704 IBA
    sarcolemma GO:0042383 IBA
 Experiment description of studies that identified RYR3 in sEVs
1
Experiment ID 237
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocytes
Sample name MIHA
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RNA Sequencing
 Protein-protein interactions for RYR3
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 RYR2 6262
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
2 ENO1 2023
Cross-Linking-MS (XL-MS) Homo sapiens
3 HNF1A  
Reconstituted Complex Homo sapiens
4 BMI1  
Affinity Capture-MS Homo sapiens
5 CUL1 8454
Affinity Capture-MS Homo sapiens
6 FKBP1B  
Reconstituted Complex Homo sapiens
7 PTEN 5728
Affinity Capture-MS Homo sapiens
8 HSPD1 3329
Cross-Linking-MS (XL-MS) Homo sapiens
9 HSD17B7 51478
Cross-Linking-MS (XL-MS) Homo sapiens
10 FKBP1A 2280
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
11 SRI 6717
Reconstituted Complex Homo sapiens
12 DSP 1832
Cross-Linking-MS (XL-MS) Homo sapiens
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