Gene description for Cnn3
Gene name
calponin 3, acidic
Gene symbol
Cnn3
Other names/aliases
1600014M03Rik C85854 Calpo3
Species
Mus musculus
Database cross references - Cnn3
ExoCarta
ExoCarta_71994
Vesiclepedia
VP_71994
Entrez Gene
71994
UniProt
Q9DAW9
Cnn3 identified in sEVs derived from the following tissue/cell type
Colon cancer cells
37309723
T-cell lymphoma cells
37309723
Gene ontology annotations for Cnn3
Experiment description of studies that identified Cnn3 in sEVs
1
Experiment ID
907
MISEV standards
✔
EM
Biophysical techniques
✔
Tsg101|Sdcbp|Cd151|Gapdh|Lamp2|Cd81|Cd82|Cd9|Cd63|Cd80|Flot2|Tfrc|Rab35|Rab5a
Enriched markers
✔
HSPA5
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
37309723
Organism
Mus musculus
Experiment description
Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells
Authors
"Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S."
Journal name
Proteomics
Publication year
2023
Sample
Colon cancer cells
Sample name
C26
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
2
Experiment ID
908
MISEV standards
✔
EM
Biophysical techniques
✔
Tsg101|Sdcbp|Cd151|Gapdh|Lamp2|Cd81|Cd82|Cd9|Cd63|Cd80|Flot2|Tfrc|Rab35|Rab5a
Enriched markers
✔
HSPA5
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
37309723
Organism
Mus musculus
Experiment description
Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells
Authors
"Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S."
Journal name
Proteomics
Publication year
2023
Sample
T-cell lymphoma cells
Sample name
EL4
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
Protein-protein interactions for Cnn3
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
Nufip2
Two-hybrid
Mus musculus
2
SPATS2
Two-hybrid
Homo sapiens
3
EXOSC7
23016
Two-hybrid
Homo sapiens
4
Lmna
16905
Affinity Capture-MS
Mus musculus
5
Pou5f1
Affinity Capture-MS
Mus musculus
6
DMRTB1
Two-hybrid
Homo sapiens
7
Cstf2t
Two-hybrid
Mus musculus
8
Eif3g
53356
Two-hybrid
Mus musculus
9
PRPF6
24148
Two-hybrid
Homo sapiens
10
Atxn1
Affinity Capture-MS
Mus musculus
11
Foxp3
Affinity Capture-MS
Mus musculus
12
Rbm14
Two-hybrid
Mus musculus
13
CEP55
55165
Two-hybrid
Homo sapiens
14
Gfm2
Co-fractionation
Mus musculus
15
Nudt21
68219
Two-hybrid
Mus musculus
16
PRRC2B
Two-hybrid
Homo sapiens
17
Mettl21e
Affinity Capture-MS
Mus musculus
18
Mapre1
13589
Two-hybrid
Mus musculus
19
CPSF7
79869
Two-hybrid
Homo sapiens
20
Pef1
Two-hybrid
Mus musculus
21
Eed
Affinity Capture-MS
Mus musculus
22
CSDE1
7812
Two-hybrid
Homo sapiens
23
TFIP11
Two-hybrid
Homo sapiens
24
Pspc1
Two-hybrid
Mus musculus
View the network
image/svg+xml
Pathways in which Cnn3 is involved
No pathways found