Experiment description of studies that identified LOC101929876 in sEVs

1 Experiment ID 282 MISEV standards ✔ Biophysical techniques ✔ Enriched markers ✘ Negative markers ✔ Particle analysis Identified molecule protein Identification method Mass spectrometry PubMed ID 25890246     Organism Homo sapiens Experiment description Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct. Authors "Xu R, Greening DW, Rai A, Ji H, Simpson RJ." Journal name Methods Publication year 2015 Sample Colorectal cancer cells Sample name LIM1863 - Ultracentrifugation - Rep 1 Isolation/purification methods Differential centrifugation Filtration Ultracentrifugation Centrifugal concentration Flotation density - Molecules identified in the study Protein Methods used in the study Mass spectrometry Western blotting

2 Experiment ID 283 MISEV standards ✔ Biophysical techniques ✔ Enriched markers ✘ Negative markers ✔ Particle analysis Identified molecule protein Identification method Mass spectrometry PubMed ID 25890246     Organism Homo sapiens Experiment description Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct. Authors "Xu R, Greening DW, Rai A, Ji H, Simpson RJ." Journal name Methods Publication year 2015 Sample Colorectal cancer cells Sample name LIM1863 - Ultracentrifugation - Rep 2 Isolation/purification methods Differential centrifugation Filtration Ultracentrifugation Centrifugal concentration Flotation density - Molecules identified in the study Protein Methods used in the study Mass spectrometry Western blotting

3 Experiment ID 285 MISEV standards ✔ Biophysical techniques ✔ Enriched markers ✘ Negative markers ✔ Particle analysis Identified molecule protein Identification method Mass spectrometry PubMed ID 25890246     Organism Homo sapiens Experiment description Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct. Authors "Xu R, Greening DW, Rai A, Ji H, Simpson RJ." Journal name Methods Publication year 2015 Sample Colorectal cancer cells Sample name LIM1863 - Sequential centrifugal ultrafiltration - Rep 1 Isolation/purification methods Differential centrifugation Filtration Sequential centrifugal ultrafiltration Centrifugal concentration Flotation density - Molecules identified in the study Protein Methods used in the study Mass spectrometry Western blotting

4 Experiment ID 286 MISEV standards ✔ Biophysical techniques ✔ Enriched markers ✘ Negative markers ✔ Particle analysis Identified molecule protein Identification method Mass spectrometry PubMed ID 25890246     Organism Homo sapiens Experiment description Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct. Authors "Xu R, Greening DW, Rai A, Ji H, Simpson RJ." Journal name Methods Publication year 2015 Sample Colorectal cancer cells Sample name LIM1863 - Sequential centrifugal ultrafiltration - Rep 2 Isolation/purification methods Differential centrifugation Filtration Sequential centrifugal ultrafiltration Centrifugal concentration Flotation density - Molecules identified in the study Protein Methods used in the study Mass spectrometry Western blotting

5 Experiment ID 224 MISEV standards ✔ Biophysical techniques ✔ Enriched markers ✔ Negative markers ✘ Particle analysis Identified molecule protein Identification method Mass spectrometry PubMed ID 25944692     Organism Homo sapiens Experiment description Proteogenomic analysis reveals exosomes are more oncogenic than ectosomes Authors "Keerthikumar S, Gangoda L, Liem M, Fonseka P, Atukorala I, Ozcitti C, Mechler A, Adda CG, Ang CS, Mathivanan S" Journal name Oncotarget Publication year 2015 Sample Neuroblastoma cells Sample name SH-SY5Y Isolation/purification methods Differential centrifugation Ultracentrifugation OptiPrep density gradient Flotation density 1.10 g/mL Molecules identified in the study Protein Methods used in the study Mass spectrometry Western blotting

6 Experiment ID 217 MISEV standards ✔ Biophysical techniques ✔ Enriched markers ✘ Negative markers ✔ Particle analysis Identified molecule protein Identification method Mass spectrometry PubMed ID 23844026     Organism Homo sapiens Experiment description Characterization of human thymic exosomes. Authors "Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O." Journal name PLoS One Publication year 2013 Sample Thymus Sample name Normal-Thymus Isolation/purification methods Differential centrifugation Filtration Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Mass spectrometry

Protein-protein interactions for LOC101929876

Protein Interactor ExoCarta ID Identification method PubMed Species 1 RPL11 6135 Co-fractionation Homo sapiens 2 RPSA 3921 Co-fractionation Homo sapiens 3 RPL13 6137 Co-fractionation Homo sapiens 4 RPL9 6133 Co-fractionation Homo sapiens 5 RPL23A 6147 Co-fractionation Homo sapiens 6 RPL26L1 51121 Co-fractionation Homo sapiens 7 RPL3L 6123 Co-fractionation Homo sapiens 8 RPS19 6223 Co-fractionation Homo sapiens 9 RPS25 6230 Co-fractionation Homo sapiens 10 RPS11 6205 Co-fractionation Homo sapiens 11 RPLP2 6181 Co-fractionation Homo sapiens 12 RPL19 6143 Co-fractionation Homo sapiens 13 RPS3A 6189 Co-fractionation Homo sapiens 14 RPS2 6187 Co-fractionation Homo sapiens 15 VAPA 9218 Co-fractionation Homo sapiens 16 RPL6 6128 Co-fractionation Homo sapiens 17 RPL15 6138 Co-fractionation Homo sapiens 18 RPL30 6156 Co-fractionation Homo sapiens 19 RPS17 6218 Co-fractionation Homo sapiens 20 RPL7A 6130 Co-fractionation Homo sapiens 21 RPL35 11224 Co-fractionation Homo sapiens 22 RPS23 6228 Co-fractionation Homo sapiens 23 RPL13A 23521 Co-fractionation Homo sapiens 24 RPL37A 6168 Co-fractionation Homo sapiens 25 ARID4B   Co-fractionation Homo sapiens 26 RPS12 6206 Co-fractionation Homo sapiens 27 RPL3 6122 Co-fractionation Homo sapiens 28 RPL10 6134 Co-fractionation Homo sapiens 29 RPS8 6202 Co-fractionation Homo sapiens 30 RPL21 6144 Co-fractionation Homo sapiens 31 RPL14 9045 Co-fractionation Homo sapiens 32 RPL12 6136 Co-fractionation Homo sapiens 33 RPL4 6124 Co-fractionation Homo sapiens 34 RPS10 6204 Co-fractionation Homo sapiens 35 RPS5 6193 Co-fractionation Homo sapiens 36 RPL34 6164 Co-fractionation Homo sapiens 37 RPS4X 6191 Co-fractionation Homo sapiens 38 RPS3 6188 Co-fractionation Homo sapiens 39 RPS18 6222 Co-fractionation Homo sapiens 40 RPL10A 4736 Co-fractionation Homo sapiens 41 RPL5 6125 Co-fractionation Homo sapiens 42 RPS20 6224 Co-fractionation Homo sapiens 43 RPL18A 6142 Co-fractionation Homo sapiens 44 RPL38 6169 Co-fractionation Homo sapiens 45 SLC25A1 6576 Co-fractionation Homo sapiens 46 RPS13 6207 Co-fractionation Homo sapiens 47 RPL31 6160 Co-fractionation Homo sapiens 48 RPL23 9349 Co-fractionation Homo sapiens 49 RPS14 6208 Co-fractionation Homo sapiens 50 RPS7 6201 Co-fractionation Homo sapiens 51 RPL8 6132 Co-fractionation Homo sapiens 52 RPL27 6155 Co-fractionation Homo sapiens 53 RPL22 6146 Co-fractionation Homo sapiens 54 RPLP1 6176 Co-fractionation Homo sapiens 55 RPL36 25873 Co-fractionation Homo sapiens 56 RPL24 6152 Co-fractionation Homo sapiens 57 TMED2 10959 Co-fractionation Homo sapiens 58 RPL27A 6157 Co-fractionation Homo sapiens 59 RPL18 6141 Co-fractionation Homo sapiens 60 RPS6 6194 Co-fractionation Homo sapiens 61 RPLP0 6175 Co-fractionation Homo sapiens 62 RPL7 6129 Co-fractionation Homo sapiens 63 RPS9 6203 Co-fractionation Homo sapiens 64 RPL26 6154 Co-fractionation Homo sapiens 65 RPS15A 6210 Co-fractionation Homo sapiens 66 RPS16 6217 Co-fractionation Homo sapiens View the network

Pathways in which LOC101929876 is involved

No pathways found