Gene description for Arid1b
Gene name AT rich interactive domain 1B (SWI-like)
Gene symbol Arid1b
Other names/aliases 8030481M12
9330189K18Rik
AI836955
Ardi1b
B230217J03Rik
mKIAA1235
Species Mus musculus
 Database cross references - Arid1b
ExoCarta ExoCarta_239985
Vesiclepedia VP_239985
Entrez Gene 239985
 Arid1b identified in sEVs derived from the following tissue/cell type
Mast cells 17486113    
 Gene ontology annotations for Arid1b
Molecular Function
    DNA binding GO:0003677 IEA
    protein binding GO:0005515 IPI
    nucleosome binding GO:0031491 IBA
Biological Process
    chromatin remodeling GO:0006338 IC
    regulation of transcription by RNA polymerase II GO:0006357 IBA
    neuron-neuron synaptic transmission GO:0007270 IMP
    positive regulation of DNA-templated transcription GO:0045893 IBA
    dendritic spine development GO:0060996 IMP
    dendritic cell dendrite assembly GO:0097026 IMP
Subcellular Localization
    nucleus GO:0005634 IDA
    nucleoplasm GO:0005654 IBA
    nucleoplasm GO:0005654 ISO
    nucleoplasm GO:0005654 TAS
    cytosol GO:0005829 ISO
    plasma membrane GO:0005886 ISO
    SWI/SNF complex GO:0016514 IBA
    SWI/SNF complex GO:0016514 IEA
    SWI/SNF complex GO:0016514 ISO
    brahma complex GO:0035060 IEA
    synapse GO:0045202 IEA
    SWI/SNF superfamily-type complex GO:0070603 IDA
    nBAF complex GO:0071565 IBA
    nBAF complex GO:0071565 IDA
 Experiment description of studies that identified Arid1b in sEVs
1
Experiment ID 15
MISEV standards
EM
Biophysical techniques
CD63
Enriched markers
Negative markers
Particle analysis
Identified molecule mrna
Identification method Microarray
PubMed ID 17486113    
Organism Mus musculus
Homo sapiens
Experiment description Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.
Authors "Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO"
Journal name NCB
Publication year 2007
Sample Mast cells
Sample name MC9
Bone marrow-derived mast cells
HMC-1
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.11-1.21 g/mL
Molecules identified in the study Protein
mRNA
miRNA
Methods used in the study Mass spectrometry [MALDI TOF]
Western blotting
Microarray
miRCURY LNA Array
 Protein-protein interactions for Arid1b
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Kat5  
Affinity Capture-Western Mus musculus
2 Kdm4c  
Affinity Capture-Western Mus musculus
3 Kdm4b  
Affinity Capture-Western Mus musculus
4 E2f5  
Affinity Capture-Western Mus musculus
5 Smarcc1  
Affinity Capture-Western Mus musculus
6 Kdm4a  
Affinity Capture-Western Mus musculus
7 Smarcd1  
Affinity Capture-Western Mus musculus
8 Smarca2  
Affinity Capture-MS Mus musculus
Affinity Capture-Western Mus musculus
9 Stat3 20848
Affinity Capture-Western Mus musculus
10 Smarca4  
Affinity Capture-Western Mus musculus
Affinity Capture-MS Mus musculus
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
11 Hdac3  
Affinity Capture-Western Mus musculus
12 E2f1  
Affinity Capture-Western Mus musculus
13 E2f4  
Affinity Capture-Western Mus musculus
View the network image/svg+xml
 Pathways in which Arid1b is involved
No pathways found





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