Gene description for RLF
Gene name rearranged L-myc fusion
Gene symbol RLF
Other names/aliases ZN-15L
ZNF292L
Species Homo sapiens
 Database cross references - RLF
ExoCarta ExoCarta_6018
Vesiclepedia VP_6018
Entrez Gene 6018
HGNC 10025
MIM 180610
UniProt Q13129  
 RLF identified in sEVs derived from the following tissue/cell type
Endothelial cells 26027894    
 Gene ontology annotations for RLF
Molecular Function
    DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981 IBA
    DNA-binding transcription activator activity, RNA polymerase II-specific GO:0001228 ISS
    DNA binding GO:0003677 IBA
    protein binding GO:0005515 IPI
    metal ion binding GO:0046872 IEA
Biological Process
    regulation of transcription by RNA polymerase II GO:0006357 IBA
    negative regulation of heterochromatin formation GO:0031452 IEA
    positive regulation of DNA-templated transcription GO:0045893 ISS
    positive regulation of transcription by RNA polymerase II GO:0045944 ISS
Subcellular Localization
    nucleus GO:0005634 IBA
    nucleus GO:0005634 ISS
 Experiment description of studies that identified RLF in sEVs
1
Experiment ID 226
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule mRNA
Identification method Small RNA sequencing (Illumina HiSeq 2000 (Solexa)
PubMed ID 26027894    
Organism Homo sapiens
Experiment description "Quantitative and qualitative analysis of small RNAs in human endothelial cells and exosomes provides insights into localized RNA processing, degradation and sorting"
Authors "Bas W. M. van Balkom, Almut S. Eisele, D. Michiel Pegtel, Sander Bervoets, Marianne C. Verhaar"
Journal name Journal of Extracellular Vesicles
Publication year 2015
Sample Endothelial cells
Sample name HMEC-1
Isolation/purification methods Differential ultracentrifugation
Sucrose density gradient
Flotation density 1.10 g/mL
Molecules identified in the study miRNA
Protein
snoRNA
lncRNA
yRNA
snRNA
mRNA
ncRNA
mtRNA
vtRNA
scaRNA
lincRNA
Methods used in the study Small RNA sequencing (Illumina HiSeq 2000 (Solexa)
Western blotting
 Protein-protein interactions for RLF
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 ZNF644  
Affinity Capture-MS Homo sapiens
2 Cbx1  
Affinity Capture-MS Mus musculus
3 RIT1 6016
Reconstituted Complex Homo sapiens
4 NUMA1 4926
Affinity Capture-MS Homo sapiens
5 PLEKHA4 57664
Affinity Capture-MS Homo sapiens
6 FASN 2194
Negative Genetic Homo sapiens
7 CBX1 10951
Affinity Capture-MS Homo sapiens
8 ZNF280D  
Affinity Capture-MS Homo sapiens
9 PARP1 142
Proximity Label-MS Homo sapiens
10 HIST1H3A 8350
Proximity Label-MS Homo sapiens
11 COIL  
Proximity Label-MS Homo sapiens
12 FEV  
Proximity Label-MS Homo sapiens
13 NFIB  
Proximity Label-MS Homo sapiens
14 HIST2H2BE 8349
Affinity Capture-MS Homo sapiens
15 KLF9 687
Proximity Label-MS Homo sapiens
16 KLF16  
Proximity Label-MS Homo sapiens
17 RIT2  
Reconstituted Complex Homo sapiens
18 DHX40  
Proximity Label-MS Homo sapiens
19 HIST1H2BG 8339
Proximity Label-MS Homo sapiens
20 ALB 213
Affinity Capture-MS Homo sapiens
21 MYB  
Proximity Label-MS Homo sapiens
22 CTTN 2017
Cross-Linking-MS (XL-MS) Homo sapiens
23 PRPF40A 55660
Two-hybrid Homo sapiens
24 SOX2  
Proximity Label-MS Homo sapiens
25 CNKSR2 22866
Affinity Capture-Western Homo sapiens
26 CENPA  
Proximity Label-MS Homo sapiens
27 NFIX 4784
Proximity Label-MS Homo sapiens
28 APEX1 328
Proximity Label-MS Homo sapiens
29 CBX3 11335
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
30 GCH1  
Two-hybrid Homo sapiens
31 KLF8  
Proximity Label-MS Homo sapiens
32 PAX6  
Proximity Label-MS Homo sapiens
33 TRIM11  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
34 NFIC 4782
Proximity Label-MS Homo sapiens
35 POLR1E  
Proximity Label-MS Homo sapiens
36 SSRP1 6749
Affinity Capture-MS Homo sapiens
37 CCT8L2  
Affinity Capture-MS Homo sapiens
38 TEAD1  
Proximity Label-MS Homo sapiens
39 CEBPA  
Proximity Label-MS Homo sapiens
40 VSX1  
Proximity Label-MS Homo sapiens
View the network image/svg+xml
 Pathways in which RLF is involved
No pathways found





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