Gene description for LOC100065722
Gene name exosome complex component RRP42-like
Gene symbol LOC100065722
Other names/aliases -
Species Equus caballus
 Database cross references - LOC100065722
ExoCarta ExoCarta_100065722
Vesiclepedia VP_100065722
Entrez Gene 100065722
UniProt None  
 LOC100065722 identified in exosomes derived from the following tissue/cell type
Follicular fluid 22116803    
 Gene ontology annotations for LOC100065722
Molecular Function
    mRNA 3'-UTR AU-rich region binding GO:0035925 IEA
Biological Process
    exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000467 IEA
    U1 snRNA 3'-end processing GO:0034473 IEA
    U4 snRNA 3'-end processing GO:0034475 IEA
    U5 snRNA 3'-end processing GO:0034476 IEA
    nuclear mRNA surveillance GO:0071028 IEA
    nuclear polyadenylation-dependent rRNA catabolic process GO:0071035 IEA
    TRAMP-dependent tRNA surveillance pathway GO:0071038 IEA
    nuclear polyadenylation-dependent mRNA catabolic process GO:0071042 IEA
Subcellular Localization
    nuclear exosome (RNase complex) GO:0000176 IEA
    cytoplasmic exosome (RNase complex) GO:0000177 IEA
 Experiment description of studies that identified LOC100065722 in exosomes
1
Experiment ID 147
MISEV standards
EM
Biophysical techniques
HSP70|CD63
Enriched markers
cytochrome c
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 22116803    
Organism Equus caballus
Experiment description Cell-Secreted Vesicles in Equine Ovarian Follicular Fluid Contain miRNAs and Proteins: A Possible New Form of Cell Communication Within the Ovarian Follicle
Authors da Silveira JC, Veeramachaneni DN, Winger QA, Carnevale EM, Bouma GJ
Journal name Biol Reprod
Publication year 2011
Sample Follicular fluid
Sample name Follicular fluid - Ovarian - Young mare
Isolation/purification methods Differential centrifugation
Exoquick
Flotation density -
Molecules identified in the study Protein
miRNA
Methods used in the study Western blotting
RT-PCR
Mass spectrometry [LTQ]
 Protein-protein interactions for LOC100065722
  Protein Interactor ExoCarta ID Identification method PubMed Species
No interactions are found.
 Pathways in which LOC100065722 is involved
No pathways found





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