Gene description for RNU4ATAC
Gene name RNA, U4atac small nuclear (U12-dependent splicing)
Gene symbol RNU4ATAC
Other names/aliases MOPD1
RNU4ATAC1
TALS
U4ATAC
Species Homo sapiens
 Database cross references - RNU4ATAC
ExoCarta ExoCarta_100151683
Vesiclepedia VP_100151683
Entrez Gene 100151683
HGNC 34016
MIM 601428
 RNU4ATAC identified in exosomes derived from the following tissue/cell type
Plasma 23663360    
 Gene ontology annotations for RNU4ATAC
Molecular Function
    U6atac snRNA binding GO:0030624 IEA
    pre-mRNA 5'-splice site binding GO:0030627 IEA
Biological Process
    spliceosomal tri-snRNP complex assembly GO:0000244 IEA
    mRNA 5'-splice site recognition GO:0000395 IEA
Subcellular Localization
    U4atac snRNP GO:0005690 IEA
 Experiment description of studies that identified RNU4ATAC in exosomes
1
Experiment ID 222
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule snRNA
Identification method RT-PCR
PubMed ID 23663360    
Organism Homo sapiens
Experiment description Characterization of human plasma-derived exosomal RNAs by deep sequencing
Authors "Huang X, Yuan T, Tschannen M, Sun Z, Jacob H, Du M, Liang M, Dittmar RL, Liu Y, Liang M, Kohli M, Thibodeau SN, Boardman L, Wang L"
Journal name BMC Genomics
Publication year 2013
Sample Plasma
Sample name Plasma - Normal
Isolation/purification methods Exoquick
Flotation density -
Molecules identified in the study miRNA
tRNA
snRNA
snoRNA
rRNA
piRNA
lncRNA
Methods used in the study RT-PCR
 Protein-protein interactions for RNU4ATAC
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 SART1 9092
Affinity Capture-Western Homo sapiens
2 PRPF4 9128
Affinity Capture-Western Homo sapiens
3 EFTUD2 9343
Affinity Capture-Western Homo sapiens
4 SNRNP200 23020
Affinity Capture-Western Homo sapiens
5 SNRNP40 9410
Affinity Capture-Western Homo sapiens
6 LSM2 57819
Affinity Capture-Western Homo sapiens
7 LSM4 25804
Affinity Capture-Western Homo sapiens
8 PRPF31 26121
Affinity Capture-Western Homo sapiens
9 SNRPF 6636
Affinity Capture-Western Homo sapiens
10 USP39 10713
Affinity Capture-Western Homo sapiens
11 DDX23 9416
Affinity Capture-Western Homo sapiens
View the network image/svg+xml
 Pathways in which RNU4ATAC is involved
No pathways found





Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here