Gene description for Slc11a1
Gene name solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
Gene symbol Slc11a1
Other names/aliases Bcg
Ity
Lsh
Nramp
Nramp1
ity
Species Mus musculus
 Database cross references - Slc11a1
ExoCarta ExoCarta_18173
Vesiclepedia VP_18173
Entrez Gene 18173
UniProt P41251  
 Slc11a1 identified in sEVs derived from the following tissue/cell type
Mast cells 17486113    
 Gene ontology annotations for Slc11a1
Molecular Function
    iron ion transmembrane transporter activity GO:0005381 IBA
    iron ion transmembrane transporter activity GO:0005381 IDA
    iron ion transmembrane transporter activity GO:0005381 ISO
    manganese ion transmembrane transporter activity GO:0005384 IBA
    manganese ion transmembrane transporter activity GO:0005384 IDA
    manganese ion transmembrane transporter activity GO:0005384 IMP
    manganese ion transmembrane transporter activity GO:0005384 ISO
    cadmium ion transmembrane transporter activity GO:0015086 IBA
    protein homodimerization activity GO:0042803 IEA
    protein homodimerization activity GO:0042803 ISO
    transition metal ion transmembrane transporter activity GO:0046915 ISO
    metal cation:proton antiporter activity GO:0051139 IBA
    metal cation:proton antiporter activity GO:0051139 IDA
    metal cation:proton antiporter activity GO:0051139 ISO
Biological Process
    negative regulation of cytokine production GO:0001818 IMP
    positive regulation of cytokine production GO:0001819 IMP
    T cell proliferation involved in immune response GO:0002309 IMP
    T cell cytokine production GO:0002369 IMP
    positive regulation of dendritic cell antigen processing and presentation GO:0002606 IMP
    positive regulation of T-helper 1 type immune response GO:0002827 IMP
    iron ion transport GO:0006826 IDA
    iron ion transport GO:0006826 ISO
    manganese ion transport GO:0006828 IBA
    manganese ion transport GO:0006828 IDA
    manganese ion transport GO:0006828 IMP
    manganese ion transport GO:0006828 ISO
    intracellular iron ion homeostasis GO:0006879 IMP
    intracellular iron ion homeostasis GO:0006879 ISO
    phagocytosis GO:0006909 IMP
    inflammatory response GO:0006954 IMP
    vacuolar acidification GO:0007035 IMP
    response to bacterium GO:0009617 IMP
    response to bacterium GO:0009617 ISO
    positive regulation of gene expression GO:0010628 IMP
    nitrite transport GO:0015707 IDA
    metal ion transport GO:0030001 IDA
    activation of protein kinase activity GO:0032147 IMP
    response to lipopolysaccharide GO:0032496 IDA
    response to lipopolysaccharide GO:0032496 IMP
    response to lipopolysaccharide GO:0032496 ISO
    type II interferon production GO:0032609 IMP
    interleukin-2 production GO:0032623 IMP
    interleukin-3 production GO:0032632 IMP
    positive regulation of type II interferon production GO:0032729 IMP
    response to type II interferon GO:0034341 IDA
    iron ion transmembrane transport GO:0034755 IBA
    iron ion transmembrane transport GO:0034755 IEA
    wound healing GO:0042060 IMP
    macrophage activation GO:0042116 IDA
    macrophage activation GO:0042116 IMP
    defense response to bacterium GO:0042742 IMP
    defense response to protozoan GO:0042832 IMP
    MHC class II biosynthetic process GO:0045342 IMP
    respiratory burst GO:0045730 IDA
    positive regulation of transcription by RNA polymerase II GO:0045944 IMP
    antigen processing and presentation of peptide antigen GO:0048002 IMP
    mRNA stabilization GO:0048255 IMP
    positive regulation of phagocytosis GO:0050766 IMP
    defense response to Gram-negative bacterium GO:0050829 IMP
    establishment of localization in cell GO:0051649 IMP
    multicellular organismal-level iron ion homeostasis GO:0060586 IMP
    cadmium ion transmembrane transport GO:0070574 IEA
    cadmium ion transmembrane transport GO:0070574 ISO
    manganese ion transmembrane transport GO:0071421 IEA
    cellular detoxification of cadmium ion GO:0098849 IEA
    cellular detoxification of cadmium ion GO:0098849 ISO
    proton transmembrane transport GO:1902600 IEA
    L-arginine transmembrane transport GO:1903826 IDA
Subcellular Localization
    lysosome GO:0005764 IDA
    lysosomal membrane GO:0005765 IBA
    lysosomal membrane GO:0005765 IDA
    late endosome GO:0005770 IDA
    late endosome GO:0005770 IMP
    plasma membrane GO:0005886 IBA
    plasma membrane GO:0005886 IEA
    plasma membrane GO:0005886 ISO
    endosome membrane GO:0010008 IBA
    endosome membrane GO:0010008 IDA
    phagocytic vesicle membrane GO:0030670 IBA
    phagocytic vesicle membrane GO:0030670 IDA
    phagocytic vesicle membrane GO:0030670 IMP
    phagocytic vesicle membrane GO:0030670 ISO
    late endosome membrane GO:0031902 IDA
    tertiary granule membrane GO:0070821 IEA
    tertiary granule membrane GO:0070821 ISO
 Experiment description of studies that identified Slc11a1 in sEVs
1
Experiment ID 15
MISEV standards
EM
Biophysical techniques
CD63
Enriched markers
Negative markers
Particle analysis
Identified molecule mrna
Identification method Microarray
PubMed ID 17486113    
Organism Mus musculus
Homo sapiens
Experiment description Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.
Authors "Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO"
Journal name NCB
Publication year 2007
Sample Mast cells
Sample name MC9
Bone marrow-derived mast cells
HMC-1
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.11-1.21 g/mL
Molecules identified in the study Protein
mRNA
miRNA
Methods used in the study Mass spectrometry [MALDI TOF]
Western blotting
Microarray
miRCURY LNA Array
 Protein-protein interactions for Slc11a1
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Bmi1  
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
2 Cbx2  
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
3 Pcgf2  
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
4 Sqstm1  
Co-localization Mus musculus
5 Fau  
Co-localization Mus musculus
View the network image/svg+xml



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