Gene description for Sema4d |
Gene name |
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D |
Gene symbol |
Sema4d |
Other names/aliases |
CD100 Semacl2 Semaj Semcl2 coll-4 |
Species |
Mus musculus |
Database cross references - Sema4d |
ExoCarta |
ExoCarta_20354 |
Vesiclepedia |
VP_20354 |
Entrez Gene |
20354 |
UniProt |
O09126
|
Sema4d identified in sEVs derived from the following tissue/cell type |
Melanoma cells
|
34957415
|
Melanoma cells
|
34957415
|
Gene ontology annotations for Sema4d |
|
Experiment description of studies that identified Sema4d in sEVs |
1 |
Experiment ID |
1117 |
MISEV standards |
✘
|
Biophysical techniques |
✔
Cd81|Icam1
|
Enriched markers |
✘
|
Negative markers |
✔
NTA
|
Particle analysis
|
|
Identified molecule |
protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
34957415
|
Organism |
Mus musculus |
Experiment description |
Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism |
Authors |
"GarcÃa-Silva S, Benito-MartÃn A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÃ, Torres-Ruiz R, RodrÃguez-Perales S, MartÃnez L, Pérez-MartÃnez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, MartÃnez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, MegÃas D, Mehrara BJ, Lyden D, Peinado H." |
Journal name |
Nat Cancer
|
Publication year |
2021 |
Sample |
Melanoma cells |
Sample name |
B16-F1R2 |
Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Western blotting Mass spectrometry |
|
|
2 |
Experiment ID |
1118 |
MISEV standards |
✘
|
Biophysical techniques |
✔
Cd81|Icam1
|
Enriched markers |
✘
|
Negative markers |
✔
NTA
|
Particle analysis
|
|
Identified molecule |
protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
34957415
|
Organism |
Mus musculus |
Experiment description |
Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism |
Authors |
"GarcÃa-Silva S, Benito-MartÃn A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÃ, Torres-Ruiz R, RodrÃguez-Perales S, MartÃnez L, Pérez-MartÃnez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, MartÃnez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, MegÃas D, Mehrara BJ, Lyden D, Peinado H." |
Journal name |
Nat Cancer
|
Publication year |
2021 |
Sample |
Melanoma cells |
Sample name |
B16-F1R2 |
Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Western blotting Mass spectrometry |
|
|
Protein-protein interactions for Sema4d |
|
Pathways in which Sema4d is involved |
|
|
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