Gene description for Ssrp1
Gene name structure specific recognition protein 1
Gene symbol Ssrp1
Other names/aliases C81323
Hmg1-rs1
Hmgi-rs3
Hmgox
T160
Species Mus musculus
 Database cross references - Ssrp1
ExoCarta ExoCarta_20833
Vesiclepedia VP_20833
Entrez Gene 20833
UniProt Q08943  
 Ssrp1 identified in exosomes derived from the following tissue/cell type
Colon cancer cells 37309723    
T-cell lymphoma cells 37309723    
 Gene ontology annotations for Ssrp1
Molecular Function
    DNA binding GO:0003677 IEA
    poly(A) RNA binding GO:0044822 ISO
    chromatin binding GO:0003682 IDA
Biological Process
    transcription, DNA-templated GO:0006351 IEA
    DNA repair GO:0006281 IEA
    biological_process GO:0008150 ND
    DNA replication GO:0006260 IEA
    cellular response to DNA damage stimulus GO:0006974 IEA
    chromatin remodeling GO:0006338 IBA
    regulation of transcription, DNA-templated GO:0006355 IBA
Subcellular Localization
    nucleus GO:0005634 ISO
    cytoplasm GO:0005737 ISO
    chromosome GO:0005694 IEA
 Experiment description of studies that identified Ssrp1 in exosomes
1
Experiment ID 907
MISEV standards
✔
EM
EV Biophysical techniques
✔
Tsg101|Sdcbp|Cd151|Gapdh|Lamp2|Cd81|Cd82|Cd9|Cd63|Cd80|Flot2|Tfrc|Rab35|Rab5a
EV Enriched markers
✔
HSPA5
EV Negative markers
✔
NTA
EV Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 37309723    
Organism Mus musculus
Experiment description Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells
Authors Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S.
Journal name Proteomics
Publication year 2023
Sample Colon cancer cells
Sample name C26
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
2
Experiment ID 908
MISEV standards
✔
EM
EV Biophysical techniques
✔
Tsg101|Sdcbp|Cd151|Gapdh|Lamp2|Cd81|Cd82|Cd9|Cd63|Cd80|Flot2|Tfrc|Rab35|Rab5a
EV Enriched markers
✔
HSPA5
EV Negative markers
✔
NTA
EV Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 37309723    
Organism Mus musculus
Experiment description Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells
Authors Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S.
Journal name Proteomics
Publication year 2023
Sample T-cell lymphoma cells
Sample name EL4
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
 Protein-protein interactions for Ssrp1
  Protein Interactor ExoCarta ID Identification method PubMed Species
No interactions are found.



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