Gene description for Sod2
Gene name superoxide dismutase 2, mitochondrial
Gene symbol Sod2
Other names/aliases -
Species Rattus norvegicus
 Database cross references - Sod2
ExoCarta ExoCarta_24787
Vesiclepedia VP_24787
Entrez Gene 24787
UniProt P07895  
 Sod2 identified in sEVs derived from the following tissue/cell type
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
 Gene ontology annotations for Sod2
Molecular Function
    DNA binding GO:0003677 IDA
    superoxide dismutase activity GO:0004784 IBA
    superoxide dismutase activity GO:0004784 IDA
    superoxide dismutase activity GO:0004784 ISO
    superoxide dismutase activity GO:0004784 ISS
    oxidoreductase activity GO:0016491 ISO
    oxygen binding GO:0019825 IDA
    enzyme binding GO:0019899 IPI
    manganese ion binding GO:0030145 IBA
    manganese ion binding GO:0030145 IDA
    manganese ion binding GO:0030145 ISO
    manganese ion binding GO:0030145 ISS
    identical protein binding GO:0042802 IPI
    identical protein binding GO:0042802 ISO
Biological Process
    response to reactive oxygen species GO:0000302 ISO
    response to superoxide GO:0000303 ISO
    response to superoxide GO:0000303 ISO
    response to hypoxia GO:0001666 IEP
    release of cytochrome c from mitochondria GO:0001836 ISO
    liver development GO:0001889 ISO
    detection of oxygen GO:0003032 ISO
    acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure GO:0003069 ISO
    regulation of transcription by RNA polymerase II GO:0006357 ISO
    regulation of transcription by RNA polymerase II GO:0006357 ISO
    regulation of transcription by RNA polymerase II GO:0006357 ISS
    glutathione metabolic process GO:0006749 ISO
    superoxide metabolic process GO:0006801 ISO
    superoxide metabolic process GO:0006801 ISO
    superoxide metabolic process GO:0006801 ISS
    response to oxidative stress GO:0006979 IEP
    response to oxidative stress GO:0006979 ISO
    mitochondrion organization GO:0007005 ISO
    heart development GO:0007507 ISO
    sensory perception of sound GO:0007605 ISO
    locomotory behavior GO:0007626 ISO
    regulation of blood pressure GO:0008217 ISO
    negative regulation of cell population proliferation GO:0008285 ISO
    intrinsic apoptotic signaling pathway in response to DNA damage GO:0008630 ISO
    intrinsic apoptotic signaling pathway in response to oxidative stress GO:0008631 ISO
    apoptotic mitochondrial changes GO:0008637 ISO
    response to xenobiotic stimulus GO:0009410 IDA
    post-embryonic development GO:0009791 ISO
    response to manganese ion GO:0010042 IEP
    response to zinc ion GO:0010043 IEP
    response to selenium ion GO:0010269 IEP
    response to gamma radiation GO:0010332 ISO
    positive regulation of hydrogen peroxide biosynthetic process GO:0010729 IMP
    response to activity GO:0014823 IEP
    response to activity GO:0014823 ISO
    removal of superoxide radicals GO:0019430 IDA
    removal of superoxide radicals GO:0019430 ISO
    removal of superoxide radicals GO:0019430 ISO
    respiratory electron transport chain GO:0022904 ISO
    hemopoiesis GO:0030097 ISO
    positive regulation of cell migration GO:0030335 ISO
    response to nutrient levels GO:0031667 IDA
    intracellular oxygen homeostasis GO:0032364 ISO
    response to lipopolysaccharide GO:0032496 IEP
    response to L-ascorbic acid GO:0033591 IEP
    response to silicon dioxide GO:0034021 IEP
    cellular response to oxidative stress GO:0034599 ISO
    cellular response to oxidative stress GO:0034599 ISS
    response to isolation stress GO:0035900 IEP
    response to immobilization stress GO:0035902 IEP
    vasodilation GO:0042311 ISO
    response to hydrogen peroxide GO:0042542 IEP
    response to hydrogen peroxide GO:0042542 ISO
    superoxide anion generation GO:0042554 ISO
    hydrogen peroxide metabolic process GO:0042743 IMP
    negative regulation of apoptotic process GO:0043066 IMP
    negative regulation of neuron apoptotic process GO:0043524 ISO
    positive regulation of nitric oxide biosynthetic process GO:0045429 ISO
    negative regulation of fat cell differentiation GO:0045599 ISO
    response to cadmium ion GO:0046686 IEP
    negative regulation of fibroblast proliferation GO:0048147 ISO
    neuron development GO:0048666 ISO
    response to axon injury GO:0048678 ISO
    erythrophore differentiation GO:0048773 ISO
    hydrogen peroxide biosynthetic process GO:0050665 IDA
    regulation of catalytic activity GO:0050790 ISO
    protein homotetramerization GO:0051289 ISO
    response to electrical stimulus GO:0051602 IEP
    regulation of mitochondrial membrane potential GO:0051881 ISO
    response to hyperoxia GO:0055093 ISO
    multicellular organismal-level iron ion homeostasis GO:0060586 ISO
    response to magnetism GO:0071000 IEP
    cellular response to ethanol GO:0071361 IEP
    negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway GO:1902176 ISO
    negative regulation of membrane hyperpolarization GO:1902631 IMP
    negative regulation of vascular associated smooth muscle cell proliferation GO:1904706 ISO
    positive regulation of vascular associated smooth muscle cell apoptotic process GO:1905461 ISO
    positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching GO:1905932 ISO
Subcellular Localization
    mitochondrion GO:0005739 IBA
    mitochondrion GO:0005739 ISO
    mitochondrial matrix GO:0005759 ISO
    mitochondrial nucleoid GO:0042645 IDA
 Experiment description of studies that identified Sod2 in sEVs
1
Experiment ID 90
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E"
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
2
Experiment ID 94
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
3
Experiment ID 96
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
4
Experiment ID 97
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
5
Experiment ID 98
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D7 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.25 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
 Protein-protein interactions for Sod2
  Protein Interactor ExoCarta ID Identification method PubMed Species
No interactions are found.



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