Gene description for Clu
Gene name clusterin
Gene symbol Clu
Other names/aliases APOJ
CLI
DAG
RATTRPM2B
SGP-2
SGP2
SP-40
SP40
TRPM-2
TRPM2B
Trpm2
Trpmb
Species Rattus norvegicus
 Database cross references - Clu
ExoCarta ExoCarta_24854
Vesiclepedia VP_24854
Entrez Gene 24854
UniProt P05371  
 Clu identified in sEVs derived from the following tissue/cell type
Hepatocytes 19367702    
Reticulocytes 21828046    
 Gene ontology annotations for Clu
Molecular Function
    amyloid-beta binding GO:0001540 IEA
    amyloid-beta binding GO:0001540 ISO
    signaling receptor binding GO:0005102 ISO
    protein binding GO:0005515 IPI
    ATP hydrolysis activity GO:0016887 ISO
    ATP hydrolysis activity GO:0016887 ISS
    ubiquitin protein ligase binding GO:0031625 IEA
    ubiquitin protein ligase binding GO:0031625 ISO
    ubiquitin protein ligase binding GO:0031625 ISS
    protein-containing complex binding GO:0044877 IEA
    protein-containing complex binding GO:0044877 ISO
    receptor ligand activity GO:0048018 IEA
    receptor ligand activity GO:0048018 ISO
    tau protein binding GO:0048156 IEA
    tau protein binding GO:0048156 ISO
    low-density lipoprotein particle receptor binding GO:0050750 IEA
    low-density lipoprotein particle receptor binding GO:0050750 ISO
    unfolded protein binding GO:0051082 IEA
    unfolded protein binding GO:0051082 ISO
    unfolded protein binding GO:0051082 ISS
    misfolded protein binding GO:0051787 IBA
    misfolded protein binding GO:0051787 IEA
    misfolded protein binding GO:0051787 ISO
    misfolded protein binding GO:0051787 ISS
    protein carrier chaperone GO:0140597 IEA
    protein carrier chaperone GO:0140597 ISO
Biological Process
    cell morphogenesis GO:0000902 IEA
    cell morphogenesis GO:0000902 ISO
    cell morphogenesis GO:0000902 ISS
    microglial cell activation GO:0001774 IEA
    microglial cell activation GO:0001774 ISO
    microglial cell activation GO:0001774 ISS
    immune complex clearance GO:0002434 IEA
    immune complex clearance GO:0002434 ISO
    immune complex clearance GO:0002434 ISS
    signal transduction GO:0007165 IEA
    spermatogenesis GO:0007283 IEA
    positive regulation of cell population proliferation GO:0008284 IMP
    response to light stimulus GO:0009416 IEP
    response to virus GO:0009615 IEA
    response to virus GO:0009615 ISO
    positive regulation of gene expression GO:0010628 IGI
    protein import GO:0017038 IEA
    protein import GO:0017038 ISO
    protein import GO:0017038 ISS
    endocrine pancreas development GO:0031018 IMP
    negative regulation of protein-containing complex assembly GO:0031333 IEA
    negative regulation of protein-containing complex assembly GO:0031333 ISO
    negative regulation of protein-containing complex assembly GO:0031333 ISS
    positive regulation of protein-containing complex assembly GO:0031334 IEA
    positive regulation of protein-containing complex assembly GO:0031334 ISO
    central nervous system myelin maintenance GO:0032286 IEA
    central nervous system myelin maintenance GO:0032286 ISO
    central nervous system myelin maintenance GO:0032286 ISS
    positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0032436 IBA
    positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0032436 IEA
    positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0032436 ISO
    positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0032436 ISS
    positive regulation of tumor necrosis factor production GO:0032760 IEA
    positive regulation of tumor necrosis factor production GO:0032760 ISO
    positive regulation of tumor necrosis factor production GO:0032760 ISS
    response to potassium ion GO:0035864 IEP
    regulation of cell population proliferation GO:0042127 IEA
    regulation of cell population proliferation GO:0042127 ISO
    regulation of cell population proliferation GO:0042127 ISS
    regulation of apoptotic process GO:0042981 IBA
    positive regulation of apoptotic process GO:0043065 IEA
    positive regulation of apoptotic process GO:0043065 ISO
    positive regulation of apoptotic process GO:0043065 ISS
    negative regulation of apoptotic process GO:0043066 IMP
    negative regulation of neuron apoptotic process GO:0043524 IGI
    estrous cycle GO:0044849 IEP
    positive regulation of nitric oxide biosynthetic process GO:0045429 IEA
    positive regulation of nitric oxide biosynthetic process GO:0045429 ISO
    positive regulation of nitric oxide biosynthetic process GO:0045429 ISS
    positive regulation of cell differentiation GO:0045597 IMP
    positive regulation of receptor-mediated endocytosis GO:0048260 IEA
    positive regulation of receptor-mediated endocytosis GO:0048260 ISO
    positive regulation of receptor-mediated endocytosis GO:0048260 ISS
    neuron projection morphogenesis GO:0048812 IMP
    protein stabilization GO:0050821 IDA
    protein stabilization GO:0050821 IEA
    protein stabilization GO:0050821 ISO
    protein stabilization GO:0050821 ISS
    positive regulation of NF-kappaB transcription factor activity GO:0051092 ISO
    positive regulation of NF-kappaB transcription factor activity GO:0051092 ISS
    chaperone-mediated protein complex assembly GO:0051131 IEA
    chaperone-mediated protein complex assembly GO:0051131 ISO
    chaperone-mediated protein complex assembly GO:0051131 ISS
    response to misfolded protein GO:0051788 IEA
    response to misfolded protein GO:0051788 ISO
    response to misfolded protein GO:0051788 ISS
    chaperone-mediated protein folding GO:0061077 IEA
    chaperone-mediated protein folding GO:0061077 ISO
    chaperone-mediated protein folding GO:0061077 ISS
    microglial cell proliferation GO:0061518 IEA
    microglial cell proliferation GO:0061518 ISO
    microglial cell proliferation GO:0061518 ISS
    protein targeting to lysosome involved in chaperone-mediated autophagy GO:0061740 IEA
    protein targeting to lysosome involved in chaperone-mediated autophagy GO:0061740 ISO
    cellular response to growth factor stimulus GO:0071363 IEP
    intrinsic apoptotic signaling pathway GO:0097193 ISO
    intrinsic apoptotic signaling pathway GO:0097193 ISS
    amyloid-beta clearance GO:0097242 IEA
    amyloid-beta clearance GO:0097242 ISO
    regulation of amyloid-beta clearance GO:1900221 IEA
    regulation of amyloid-beta clearance GO:1900221 ISO
    regulation of amyloid-beta clearance GO:1900221 ISS
    positive regulation of amyloid-beta formation GO:1902004 IEA
    positive regulation of amyloid-beta formation GO:1902004 ISO
    positive regulation of amyloid-beta formation GO:1902004 ISS
    negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage GO:1902230 IEA
    negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage GO:1902230 ISO
    negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage GO:1902230 ISS
    negative regulation of amyloid-beta formation GO:1902430 IEA
    negative regulation of amyloid-beta formation GO:1902430 ISO
    negative regulation of amyloid-beta formation GO:1902430 ISS
    regulation of neuronal signal transduction GO:1902847 IEA
    regulation of neuronal signal transduction GO:1902847 ISO
    regulation of neuronal signal transduction GO:1902847 ISS
    positive regulation of neurofibrillary tangle assembly GO:1902998 IEA
    positive regulation of neurofibrillary tangle assembly GO:1902998 ISO
    positive regulation of neurofibrillary tangle assembly GO:1902998 ISS
    negative regulation of response to endoplasmic reticulum stress GO:1903573 IEA
    negative regulation of response to endoplasmic reticulum stress GO:1903573 ISO
    negative regulation of amyloid fibril formation GO:1905907 IEA
    negative regulation of amyloid fibril formation GO:1905907 ISO
    negative regulation of amyloid fibril formation GO:1905907 ISS
    positive regulation of ubiquitin-dependent protein catabolic process GO:2000060 ISO
    positive regulation of ubiquitin-dependent protein catabolic process GO:2000060 ISS
    positive regulation of intrinsic apoptotic signaling pathway GO:2001244 ISO
    positive regulation of intrinsic apoptotic signaling pathway GO:2001244 ISS
Subcellular Localization
    extracellular region GO:0005576 IEA
    extracellular space GO:0005615 IBA
    extracellular space GO:0005615 IDA
    extracellular space GO:0005615 ISO
    extracellular space GO:0005615 ISO
    extracellular space GO:0005615 ISS
    nucleus GO:0005634 IBA
    nucleus GO:0005634 IEA
    nucleus GO:0005634 ISO
    cytoplasm GO:0005737 ISO
    cytoplasm GO:0005737 ISS
    mitochondrion GO:0005739 ISO
    mitochondrion GO:0005739 ISS
    mitochondrial inner membrane GO:0005743 IEA
    mitochondrial inner membrane GO:0005743 ISO
    mitochondrial inner membrane GO:0005743 ISS
    endoplasmic reticulum GO:0005783 IEA
    Golgi apparatus GO:0005794 ISO
    cytosol GO:0005829 IDA
    cytosol GO:0005829 IEA
    cytosol GO:0005829 ISO
    cytosol GO:0005829 ISS
    cytoskeleton GO:0005856 IEA
    cytoskeleton GO:0005856 ISO
    cell surface GO:0009986 IEA
    cell surface GO:0009986 ISO
    membrane GO:0016020 ISO
    aggresome GO:0016235 IDA
    growth cone GO:0030426 IDA
    mitochondrial membrane GO:0031966 IEA
    protein-containing complex GO:0032991 ISO
    spherical high-density lipoprotein particle GO:0034366 IEA
    spherical high-density lipoprotein particle GO:0034366 ISO
    spherical high-density lipoprotein particle GO:0034366 ISS
    chromaffin granule GO:0042583 IEA
    intracellular membrane-bounded organelle GO:0043231 ISO
    synapse GO:0045202 IEA
    synapse GO:0045202 ISO
    perinuclear region of cytoplasm GO:0048471 IDA
    perinuclear region of cytoplasm GO:0048471 IEA
    perinuclear region of cytoplasm GO:0048471 ISO
    collagen-containing extracellular matrix GO:0062023 ISS
    cell periphery GO:0071944 IEA
    cell periphery GO:0071944 ISO
    neurofibrillary tangle GO:0097418 IEA
    neurofibrillary tangle GO:0097418 ISO
    neurofibrillary tangle GO:0097418 ISS
    apical dendrite GO:0097440 IEA
    apical dendrite GO:0097440 ISO
    apical dendrite GO:0097440 ISS
    perinuclear endoplasmic reticulum lumen GO:0099020 IEA
    perinuclear endoplasmic reticulum lumen GO:0099020 ISO
    perinuclear endoplasmic reticulum lumen GO:0099020 ISS
 Experiment description of studies that identified Clu in sEVs
1
Experiment ID 35
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 19367702    
Organism Rattus norvegicus
Experiment description Characterization and Comprehensive Proteome Profiling of Exosomes Secreted by Hepatocytes.
Authors "Conde-Vancells J, Rodriguez-Suarez E, Embade N, Gil D, Matthiesen R, Valle M, Elortza F, Lu SC, Mato JM, Falcon-Perez JM"
Journal name JPR
Publication year 2008
Sample Hepatocytes
Sample name Hepatocytes
Isolation/purification methods Differential centrifugation
Filtration
Sucrose density gradient
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [QTOF]
Western blotting
2
Experiment ID 90
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E"
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
 Protein-protein interactions for Clu
  Protein Interactor ExoCarta ID Identification method PubMed Species
No interactions are found.



Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here