Gene description for Ski
Gene name SKI proto-oncogene
Gene symbol Ski
Other names/aliases RGD1565591
c-ski
Species Rattus norvegicus
 Database cross references - Ski
ExoCarta ExoCarta_313757
Vesiclepedia VP_313757
Entrez Gene 313757
 Ski identified in sEVs derived from the following tissue/cell type
Pancreatic cancer cells 20124479    
Pancreatic cancer cells 20124479    
 Gene ontology annotations for Ski
Molecular Function
    RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000978 IBA
    DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981 IBA
    DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001227 ISO
    chromatin binding GO:0003682 ISO
    transcription corepressor activity GO:0003714 ISO
    zinc ion binding GO:0008270 ISO
    protein kinase binding GO:0019901 ISO
    protein domain specific binding GO:0019904 ISO
    ubiquitin protein ligase binding GO:0031625 ISO
    identical protein binding GO:0042802 ISO
    SMAD binding GO:0046332 IBA
    SMAD binding GO:0046332 ISO
    histone deacetylase inhibitor activity GO:0046811 ISO
    DNA-binding transcription factor binding GO:0140297 ISO
Biological Process
    negative regulation of transcription by RNA polymerase II GO:0000122 IBA
    negative regulation of transcription by RNA polymerase II GO:0000122 ISO
    negative regulation of transcription by RNA polymerase II GO:0000122 ISO
    neural tube closure GO:0001843 ISO
    lens morphogenesis in camera-type eye GO:0002089 ISO
    negative regulation of cell population proliferation GO:0008285 ISO
    anterior/posterior axis specification GO:0009948 ISO
    negative regulation of Schwann cell proliferation GO:0010626 ISO
    myotube differentiation GO:0014902 ISO
    myotube differentiation GO:0014902 ISO
    negative regulation of transcription by RNA polymerase III GO:0016480 ISO
    olfactory bulb development GO:0021772 ISO
    myelination in peripheral nervous system GO:0022011 ISO
    embryonic limb morphogenesis GO:0030326 ISO
    negative regulation of transforming growth factor beta receptor signaling pathway GO:0030512 IBA
    negative regulation of transforming growth factor beta receptor signaling pathway GO:0030512 ISO
    negative regulation of transforming growth factor beta receptor signaling pathway GO:0030512 ISO
    negative regulation of BMP signaling pathway GO:0030514 IBA
    negative regulation of BMP signaling pathway GO:0030514 ISO
    negative regulation of BMP signaling pathway GO:0030514 ISO
    negative regulation of activin receptor signaling pathway GO:0032926 ISO
    somatic stem cell population maintenance GO:0035019 ISO
    camera-type eye development GO:0043010 ISO
    nose morphogenesis GO:0043585 ISO
    negative regulation of osteoblast differentiation GO:0045668 ISO
    positive regulation of transcription by RNA polymerase II GO:0045944 ISO
    fibroblast proliferation GO:0048144 ISO
    negative regulation of fibroblast proliferation GO:0048147 ISO
    camera-type eye morphogenesis GO:0048593 ISO
    skeletal muscle fiber development GO:0048741 ISO
    roof of mouth development GO:0060021 ISO
    cardiac muscle cell proliferation GO:0060038 IEP
    retina development in camera-type eye GO:0060041 ISO
    face morphogenesis GO:0060325 ISO
    bone morphogenesis GO:0060349 ISO
    negative regulation of SMAD protein signal transduction GO:0060392 ISO
Subcellular Localization
    nucleus GO:0005634 IBA
    nucleus GO:0005634 ISO
    nucleoplasm GO:0005654 ISO
    transcription regulator complex GO:0005667 IBA
    transcription regulator complex GO:0005667 ISO
    cytoplasm GO:0005737 IBA
    cytoplasm GO:0005737 ISO
    centrosome GO:0005813 ISO
    nuclear body GO:0016604 ISO
    PML body GO:0016605 ISO
    transcription repressor complex GO:0017053 ISO
    protein-containing complex GO:0032991 ISO
 Experiment description of studies that identified Ski in sEVs
1
Experiment ID 92
MISEV standards
EM
Biophysical techniques
HSP70|GAPDH|CD9|CD151
Enriched markers
Negative markers
Particle analysis
Identified molecule mrna
Identification method Microarray
PubMed ID 20124479    
Organism Rattus norvegicus
Experiment description Cell surface tetraspanin Tspan8 contributes to molecular pathways of exosome-induced endothelial cell activation.
Authors "Nazarenko I, Rana S, Baumann A, McAlear J, Hellwig A, Trendelenburg M, Lochnit G, Preissner KT, Zoller M."
Journal name CR
Publication year 2010
Sample Pancreatic cancer cells
Sample name AS
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Flotation density 1.14-1.17 g/mL
Molecules identified in the study Protein
mRNA
Methods used in the study RT-PCR
Western blotting
RatRef-12 Microarray
FACS
Mass spectrometry [MALDI TOF]
2
Experiment ID 93
MISEV standards
EM
Biophysical techniques
HSP70|GAPDH|CD9|CD151
Enriched markers
Negative markers
Particle analysis
Identified molecule mrna
Identification method Microarray
PubMed ID 20124479    
Organism Rattus norvegicus
Experiment description Cell surface tetraspanin Tspan8 contributes to molecular pathways of exosome-induced endothelial cell activation.
Authors "Nazarenko I, Rana S, Baumann A, McAlear J, Hellwig A, Trendelenburg M, Lochnit G, Preissner KT, Zoller M."
Journal name CR
Publication year 2010
Sample Pancreatic cancer cells
Sample name AS-Tspan8
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Flotation density 1.14-1.17 g/mL
Molecules identified in the study Protein
mRNA
Methods used in the study RT-PCR
Western blotting
 Protein-protein interactions for Ski
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Rnf111  
Affinity Capture-Western Rattus norvegicus
2 Smurf2  
Affinity Capture-Western Rattus norvegicus
View the network image/svg+xml
 Pathways in which Ski is involved
No pathways found





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