Gene description for Cdc42
Gene name cell division cycle 42
Gene symbol Cdc42
Other names/aliases -
Species Rattus norvegicus
 Database cross references - Cdc42
ExoCarta ExoCarta_64465
Entrez Gene 64465
UniProt Q8CFN2  
 Cdc42 identified in exosomes derived from the following tissue/cell type
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Urine 20535238    
 Gene ontology annotations for Cdc42
Molecular Function
    identical protein binding GO:0042802 ISO
    mitogen-activated protein kinase kinase kinase binding GO:0031435 IPI
    protein binding GO:0005515 IPI
    thioesterase binding GO:0031996 ISO
    GTPase activity GO:0003924 TAS
    apolipoprotein A-I receptor binding GO:0034191 ISO
    GTP-dependent protein binding GO:0030742 ISO
    GTP binding GO:0005525 TAS
    protein kinase binding GO:0019901 ISO
Biological Process
    positive regulation of DNA replication GO:0045740 IMP
    regulation of filopodium assembly GO:0051489 ISS
    positive regulation of intracellular protein transport GO:0090316 IMP
    filopodium assembly GO:0046847 ISO
    actin filament bundle assembly GO:0051017 ISO
    regulation of protein metabolic process GO:0051246 ISO
    keratinocyte development GO:0003334 ISO
    actin cytoskeleton organization GO:0030036 ISO
    response to glucose GO:0009749 TAS
    positive regulation of cytokinesis GO:0032467 ISS
    small GTPase mediated signal transduction GO:0007264 IEA
    hair follicle morphogenesis GO:0031069 ISO
    positive regulation of synapse structural plasticity GO:0051835 IMP
    endocytosis GO:0006897 ISO
    negative regulation of protein complex assembly GO:0031333 ISO
    positive regulation of neuron apoptotic process GO:0043525 IMP
    negative regulation of gene expression GO:0010629 ISO
    establishment of cell polarity GO:0030010 TAS
    canonical Wnt signaling pathway GO:0060070 ISO
    nucleus localization GO:0051647 ISO
    epithelial-mesenchymal cell signaling GO:0060684 ISO
    submandibular salivary gland formation GO:0060661 IEP
    positive regulation of JNK cascade GO:0046330 IDA
    regulation of protein heterodimerization activity GO:0043497 ISO
    hair follicle placode formation GO:0060789 ISO
    positive regulation of MAPK cascade GO:0043410 ISO
    heart contraction GO:0060047 ISO
    establishment of Golgi localization GO:0051683 IMP
    epidermis morphogenesis GO:0048730 ISO
    actin filament branching GO:0090135 IMP
    keratinization GO:0031424 ISO
    neuron fate determination GO:0048664 ISO
    positive regulation of peptidyl-serine phosphorylation GO:0033138 ISO
    metabolic process GO:0008152 TAS
    sprouting angiogenesis GO:0002040 IMP
    positive regulation of pseudopodium assembly GO:0031274 ISO
    single organismal cell-cell adhesion GO:0016337 ISO
    regulation of protein kinase activity GO:0045859 ISO
    regulation of exocytosis GO:0017157 TAS
    actin filament organization GO:0007015 IMP
    cardiac conduction system development GO:0003161 ISO
    epithelial cell-cell adhesion GO:0090136 ISO
    substantia nigra development GO:0021762 ISO
    positive regulation of protein phosphorylation GO:0001934 ISO
    establishment or maintenance of apical/basal cell polarity GO:0035088 ISO
    adherens junction organization GO:0034332 ISO
    regulation of attachment of spindle microtubules to kinetochore GO:0051988 ISS
    regulation of mitotic nuclear division GO:0007088 ISO
    multicellular organism growth GO:0035264 ISO
    dendritic cell migration GO:0036336 ISO
    positive regulation of hair follicle cell proliferation GO:0071338 ISO
    positive regulation of metalloenzyme activity GO:0048554 IMP
    Golgi organization GO:0007030 IMP
    organelle transport along microtubule GO:0072384 IMP
    positive regulation of substrate adhesion-dependent cell spreading GO:1900026 ISS
    cellular protein localization GO:0034613 ISO
    positive regulation of phosphatidylinositol 3-kinase activity GO:0043552 ISO
    positive regulation of gene expression GO:0010628 ISO
    regulation of protein stability GO:0031647 ISO
    nuclear migration GO:0007097 ISO
    regulation of protein catabolic process GO:0042176 ISO
Subcellular Localization
    neuronal cell body GO:0043025 ISO
    apical part of cell GO:0045177 ISO
    microtubule organizing center GO:0005815 IEA
    cell periphery GO:0071944 ISO
    cytosol GO:0005829 TAS
    cytoplasmic ribonucleoprotein granule GO:0036464 ISO
    cell GO:0005623 ISO
    extracellular exosome GO:0070062 ISO
    storage vacuole GO:0000322 ISO
    cell projection GO:0042995 ISO
    membrane GO:0016020 ISS
    cytoplasm GO:0005737 ISO
    neuron projection GO:0043005 ISO
    midbody GO:0030496 ISS
    cell-cell junction GO:0005911 ISO
    spindle midzone GO:0051233 ISS
    plasma membrane GO:0005886 ISO
    mitotic spindle GO:0072686 ISS
    myelin sheath GO:0043209 ISO
    leading edge membrane GO:0031256 ISO
    focal adhesion GO:0005925 ISO
    secretory granule GO:0030141 IDA
    filopodium GO:0030175 ISO
    Golgi membrane GO:0000139 IDA
 Experiment description of studies that identified Cdc42 in exosomes
1
Experiment ID 90
ISEV standards
EM
EV Biophysical techniques
HSC70|HSP90|TSG101
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
2
Experiment ID 94
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
3
Experiment ID 95
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D7 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.25 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
4
Experiment ID 96
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
5
Experiment ID 97
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
6
Experiment ID 98
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D7 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.25 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
7
Experiment ID 99
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [QSTAR]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
8
Experiment ID 100
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [QSTAR]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
9
Experiment ID 101
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [QSTAR]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D7 Rep 3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.25 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
10
Experiment ID 192
ISEV standards
CEM
EV Biophysical techniques
TSG101|HSP70
EV Cytosolic markers
CD63|CD81|FLOT
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20535238    
Organism Rattus norvegicus
Experiment description Candidate biomarkers in exosome-like vesicles purified from rat and mouse urine samples.
Authors Conde-Vancells J, Rodriguez-Suarez E, Gonzalez E, Berisa A, Gil D, Embade N, Valle M, Luka Z, Elortza F, Wagner C, Lu SC, Mato JM, Falcon-Perez M.
Journal name Proteomics Clin Appl
Publication year 2010
Sample Urine
Sample name Urine - Rats of liver injury
Isolation/purification methods Differential centrifugation
Filtration
UltracentrifugationSucrose cushion
Sucrose density gradient
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for Cdc42
  Protein Interactor ExoCarta ID Identification method PubMed Species
No interactions are found.



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