Gene description for SNORA80E
Gene name small nucleolar RNA, H/ACA box 80E
Gene symbol SNORA80E
Other names/aliases ACA42
SNORA42
Species Homo sapiens
 Database cross references - SNORA80E
ExoCarta ExoCarta_677823
Vesiclepedia VP_677823
Entrez Gene 677823
HGNC 32635
 SNORA80E identified in sEVs derived from the following tissue/cell type
Endothelial cells 26027894    
 Gene ontology annotations for SNORA80E
Biological Process
    RNA processing GO:0006396 IEA
Subcellular Localization
    nucleolus GO:0005730 IEA
 Experiment description of studies that identified SNORA80E in sEVs
1
Experiment ID 226
MISEV standards
EM
Biophysical techniques
GAPDH|CD9|FLOT1
Enriched markers
LMNA|H2AFX|ATP5A1|TOMM20
Negative markers
Particle analysis
Identified molecule snoRNA
Identification method Small RNA sequencing (Illumina HiSeq 2000 (Solexa)
PubMed ID 26027894    
Organism Homo sapiens
Experiment description "Quantitative and qualitative analysis of small RNAs in human endothelial cells and exosomes provides insights into localized RNA processing, degradation and sorting"
Authors "Bas W. M. van Balkom, Almut S. Eisele, D. Michiel Pegtel, Sander Bervoets, Marianne C. Verhaar"
Journal name Journal of Extracellular Vesicles
Publication year 2015
Sample Endothelial cells
Sample name HMEC-1
Isolation/purification methods Differential ultracentrifugation
Sucrose density gradient
Flotation density 1.10 g/mL
Molecules identified in the study miRNA
Protein
snoRNA
lncRNA
yRNA
snRNA
mRNA
ncRNA
mtRNA
vtRNA
scaRNA
lincRNA
Methods used in the study Small RNA sequencing (Illumina HiSeq 2000 (Solexa)
Western blotting
 Protein-protein interactions for SNORA80E
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 SIRT7  
Affinity Capture-RNA Homo sapiens
View the network image/svg+xml
 Pathways in which SNORA80E is involved
No pathways found





Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here