Experiment description of studies that identified Ddx1 in sEVs

1 Experiment ID 907 MISEV standards ✔ EM Biophysical techniques ✔ Tsg101|Sdcbp|Cd151|Gapdh|Lamp2|Cd81|Cd82|Cd9|Cd63|Cd80|Flot2|Tfrc|Rab35|Rab5a Enriched markers ✔ HSPA5 Negative markers ✔ NTA Particle analysis Identified molecule Protein Identification method Mass spectrometry PubMed ID 37309723     Organism Mus musculus Experiment description Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells Authors "Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S." Journal name Proteomics Publication year 2023 Sample Colon cancer cells Sample name C26 Isolation/purification methods Differential centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting Mass spectrometry

2 Experiment ID 908 MISEV standards ✔ EM Biophysical techniques ✔ Tsg101|Sdcbp|Cd151|Gapdh|Lamp2|Cd81|Cd82|Cd9|Cd63|Cd80|Flot2|Tfrc|Rab35|Rab5a Enriched markers ✔ HSPA5 Negative markers ✔ NTA Particle analysis Identified molecule Protein Identification method Mass spectrometry PubMed ID 37309723     Organism Mus musculus Experiment description Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells Authors "Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S." Journal name Proteomics Publication year 2023 Sample T-cell lymphoma cells Sample name EL4 Isolation/purification methods Differential centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting Mass spectrometry

Protein-protein interactions for Ddx1

Protein Interactor ExoCarta ID Identification method PubMed Species 1 Npm1 18148 Affinity Capture-MS Mus musculus 2 Cebpa   Affinity Capture-MS Mus musculus 3 Stau1   Co-fractionation Mus musculus 4 2700060E02Rik 68045 Co-fractionation Mus musculus 5 Atxn1   Affinity Capture-MS Mus musculus 6 Tardbp 230908 Co-fractionation Mus musculus 7 Eed   Affinity Capture-MS Mus musculus 8 MKRN1 23608 Affinity Capture-MS Homo sapiens 9 Larp1   Co-fractionation Mus musculus 10 Atg16l1   Affinity Capture-MS Mus musculus 11 Gigyf2   Co-fractionation Mus musculus 12 Lsm14a   Co-fractionation Mus musculus 13 Nanog   Affinity Capture-MS Mus musculus 14 Fancd2   Affinity Capture-MS Mus musculus 15 Kctd13   Affinity Capture-MS Mus musculus 16 Rtcb 28088 Co-fractionation Mus musculus 17 Hnrnpa2b1 53379 Co-fractionation Mus musculus View the network

Pathways in which Ddx1 is involved

No pathways found