Gene description for Braf
Gene name Braf transforming gene
Gene symbol Braf
Other names/aliases 9930012E13Rik
AA120551
AA387315
AA473386
B-raf
Braf-2
Braf2
C230098H17
C87398
D6Ertd631e
Species Mus musculus
 Database cross references - Braf
ExoCarta ExoCarta_109880
Vesiclepedia VP_109880
Entrez Gene 109880
UniProt P28028  
 Braf identified in sEVs derived from the following tissue/cell type
Mast cells 17486113    
 Gene ontology annotations for Braf
Molecular Function
    protein kinase activity GO:0004672 IDA
    protein kinase activity GO:0004672 ISO
    protein serine/threonine kinase activity GO:0004674 ISO
    3-phosphoinositide-dependent protein kinase activity GO:0004676 IEA
    DNA-dependent protein kinase activity GO:0004677 IEA
    AMP-activated protein kinase activity GO:0004679 IEA
    eukaryotic translation initiation factor 2alpha kinase activity GO:0004694 IEA
    MAP kinase kinase activity GO:0004708 IEA
    MAP kinase kinase activity GO:0004708 ISO
    MAP kinase kinase kinase activity GO:0004709 IBA
    MAP kinase kinase kinase activity GO:0004709 IEA
    MAP kinase kinase kinase activity GO:0004709 ISO
    ribosomal protein S6 kinase activity GO:0004711 IEA
    calcium ion binding GO:0005509 IEA
    calcium ion binding GO:0005509 ISO
    protein binding GO:0005515 IPI
    ATP binding GO:0005524 IEA
    small GTPase binding GO:0031267 IEA
    small GTPase binding GO:0031267 ISO
    mitogen-activated protein kinase kinase binding GO:0031434 IEA
    mitogen-activated protein kinase kinase binding GO:0031434 ISO
    histone H3S10 kinase activity GO:0035175 IEA
    histone H3T11 kinase activity GO:0035402 IEA
    histone H3T6 kinase activity GO:0035403 IEA
    histone H2AXS139 kinase activity GO:0035979 IEA
    identical protein binding GO:0042802 IEA
    identical protein binding GO:0042802 ISO
    histone H3S28 kinase activity GO:0044022 IEA
    histone H4S1 kinase activity GO:0044023 IEA
    histone H2AS1 kinase activity GO:0044024 IEA
    histone H2BS14 kinase activity GO:0044025 IEA
    protein-containing complex binding GO:0044877 IEA
    protein-containing complex binding GO:0044877 ISO
    histone H3T3 kinase activity GO:0072354 IEA
    histone H2AS121 kinase activity GO:0072371 IEA
    Rho-dependent protein serine/threonine kinase activity GO:0072518 IEA
    scaffold protein binding GO:0097110 IEA
    scaffold protein binding GO:0097110 ISO
    protein serine kinase activity GO:0106310 IEA
    histone H2BS36 kinase activity GO:0140823 IEA
    histone H3S57 kinase activity GO:0140855 IEA
    histone H3T45 kinase activity GO:0140857 IEA
    histone H2AT120 kinase activity GO:1990244 IEA
Biological Process
    MAPK cascade GO:0000165 IBA
    MAPK cascade GO:0000165 ISO
    myeloid progenitor cell differentiation GO:0002318 IMP
    chromatin remodeling GO:0006338 IEA
    protein phosphorylation GO:0006468 IDA
    protein phosphorylation GO:0006468 ISO
    epidermal growth factor receptor signaling pathway GO:0007173 IEA
    epidermal growth factor receptor signaling pathway GO:0007173 ISO
    visual learning GO:0008542 IMP
    positive regulation of gene expression GO:0010628 IGI
    positive regulation of gene expression GO:0010628 ISO
    negative regulation of fibroblast migration GO:0010764 IMP
    positive regulation of D-glucose transmembrane transport GO:0010828 IEA
    positive regulation of D-glucose transmembrane transport GO:0010828 ISO
    synaptic vesicle exocytosis GO:0016079 IMP
    cell differentiation GO:0030154 IGI
    thyroid gland development GO:0030878 IGI
    T cell differentiation in thymus GO:0033077 IMP
    positive regulation of peptidyl-serine phosphorylation GO:0033138 ISO
    substrate adhesion-dependent cell spreading GO:0034446 IMP
    somatic stem cell population maintenance GO:0035019 IGI
    regulation of cell population proliferation GO:0042127 IGI
    negative regulation of apoptotic process GO:0043066 ISO
    stress fiber assembly GO:0043149 IMP
    CD4-positive, alpha-beta T cell differentiation GO:0043367 IMP
    positive T cell selection GO:0043368 IMP
    CD4-positive or CD8-positive, alpha-beta T cell lineage commitment GO:0043369 IMP
    response to peptide hormone GO:0043434 IEA
    response to peptide hormone GO:0043434 ISO
    negative regulation of neuron apoptotic process GO:0043524 IMP
    negative regulation of neuron apoptotic process GO:0043524 ISO
    regulation of T cell differentiation GO:0045580 IMP
    alpha-beta T cell differentiation GO:0046632 IMP
    thymus development GO:0048538 IGI
    regulation of axon regeneration GO:0048679 IGI
    positive regulation of axon regeneration GO:0048680 IDA
    positive regulation of axonogenesis GO:0050772 IGI
    positive regulation of axonogenesis GO:0050772 IMP
    T cell receptor signaling pathway GO:0050852 IDA
    positive regulation of stress fiber assembly GO:0051496 IGI
    positive regulation of stress fiber assembly GO:0051496 IMP
    response to cAMP GO:0051591 IEA
    response to cAMP GO:0051591 ISO
    long-term synaptic potentiation GO:0060291 IMP
    head morphogenesis GO:0060323 IMP
    face development GO:0060324 IGI
    ERK1 and ERK2 cascade GO:0070371 IMP
    positive regulation of ERK1 and ERK2 cascade GO:0070374 IDA
    positive regulation of ERK1 and ERK2 cascade GO:0070374 IMP
    positive regulation of ERK1 and ERK2 cascade GO:0070374 ISO
    cellular response to calcium ion GO:0071277 IEA
    cellular response to calcium ion GO:0071277 ISO
    cellular response to xenobiotic stimulus GO:0071466 IDA
    endothelial cell apoptotic process GO:0072577 IMP
    establishment of protein localization to membrane GO:0090150 IEA
    establishment of protein localization to membrane GO:0090150 ISO
    postsynaptic modulation of chemical synaptic transmission GO:0099170 IDA
    postsynaptic modulation of chemical synaptic transmission GO:0099170 IMP
    positive regulation of substrate adhesion-dependent cell spreading GO:1900026 IMP
    cellular response to nerve growth factor stimulus GO:1990090 IEA
    negative regulation of synaptic vesicle exocytosis GO:2000301 IMP
    negative regulation of endothelial cell apoptotic process GO:2000352 IMP
Subcellular Localization
    nucleus GO:0005634 IEA
    cytoplasm GO:0005737 IBA
    cytoplasm GO:0005737 IDA
    mitochondrion GO:0005739 IBA
    mitochondrion GO:0005739 IDA
    cytosol GO:0005829 IBA
    cytosol GO:0005829 IEA
    cytosol GO:0005829 ISO
    plasma membrane GO:0005886 IBA
    plasma membrane GO:0005886 IDA
    neuron projection GO:0043005 IDA
    intracellular membrane-bounded organelle GO:0043231 ISO
    cell body GO:0044297 IDA
    presynapse GO:0098793 IEA
    postsynapse GO:0098794 IEA
    glutamatergic synapse GO:0098978 IDA
    glutamatergic synapse GO:0098978 IMP
 Experiment description of studies that identified Braf in sEVs
1
Experiment ID 15
MISEV standards
EM
Biophysical techniques
CD63
Enriched markers
Negative markers
Particle analysis
Identified molecule mrna
Identification method Microarray
PubMed ID 17486113    
Organism Mus musculus
Homo sapiens
Experiment description Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.
Authors "Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO"
Journal name NCB
Publication year 2007
Sample Mast cells
Sample name MC9
Bone marrow-derived mast cells
HMC-1
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.11-1.21 g/mL
Molecules identified in the study Protein
mRNA
miRNA
Methods used in the study Mass spectrometry [MALDI TOF]
Western blotting
Microarray
miRCURY LNA Array
 Protein-protein interactions for Braf
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Ywhaq 22630
Two-hybrid Mus musculus
2 Phkb  
Co-fractionation Mus musculus
3 Fancd2  
Affinity Capture-MS Mus musculus
4 Ywhah 22629
Two-hybrid Mus musculus
5 Map2k1 26395
Two-hybrid Mus musculus
6 Brap  
Co-fractionation Mus musculus
7 Eed  
Affinity Capture-MS Mus musculus
8 Map2k2  
Two-hybrid Mus musculus
9 Raf1  
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
10 Hras 15461
Two-hybrid Mus musculus
Two-hybrid Mus musculus
11 Pten  
Positive Genetic Mus musculus
12 Ywhaz 22631
Affinity Capture-MS Mus musculus
Two-hybrid Mus musculus
13 Nras 18176
Synthetic Lethality Mus musculus
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