Gene description for Cntn1
Gene name
contactin 1
Gene symbol
Cntn1
Other names/aliases
AW495098 CNTN F3cam
Species
Mus musculus
Database cross references - Cntn1
ExoCarta
ExoCarta_12805
Vesiclepedia
VP_12805
Entrez Gene
12805
UniProt
P12960
Cntn1 identified in sEVs derived from the following tissue/cell type
Colon cancer cells
37309723
T-cell lymphoma cells
37309723
Gene ontology annotations for Cntn1
Experiment description of studies that identified Cntn1 in sEVs
1
Experiment ID
907
MISEV standards
✔
EM
Biophysical techniques
✔
Tsg101|Sdcbp|Cd151|Gapdh|Lamp2|Cd81|Cd82|Cd9|Cd63|Cd80|Flot2|Tfrc|Rab35|Rab5a
Enriched markers
✔
HSPA5
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
37309723
Organism
Mus musculus
Experiment description
Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells
Authors
"Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S."
Journal name
Proteomics
Publication year
2023
Sample
Colon cancer cells
Sample name
C26
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
2
Experiment ID
908
MISEV standards
✔
EM
Biophysical techniques
✔
Tsg101|Sdcbp|Cd151|Gapdh|Lamp2|Cd81|Cd82|Cd9|Cd63|Cd80|Flot2|Tfrc|Rab35|Rab5a
Enriched markers
✔
HSPA5
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
37309723
Organism
Mus musculus
Experiment description
Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells
Authors
"Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S."
Journal name
Proteomics
Publication year
2023
Sample
T-cell lymphoma cells
Sample name
EL4
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
Protein-protein interactions for Cntn1
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
Uqcrh
Co-fractionation
Mus musculus
2
Cox6b1
Co-fractionation
Mus musculus
3
SNCA
6622
Affinity Capture-MS
Homo sapiens
4
Fmr1
Affinity Capture-MS
Mus musculus
5
App
11820
Affinity Capture-MS
Mus musculus
6
Kctd13
Affinity Capture-MS
Mus musculus
7
Syp
Co-fractionation
Mus musculus
8
Shank3
Affinity Capture-MS
Mus musculus
Affinity Capture-MS
Mus musculus
9
Dlg4
Affinity Capture-MS
Mus musculus
Affinity Capture-MS
Mus musculus
10
Mapt
Affinity Capture-MS
Mus musculus
11
Prnp
19122
Affinity Capture-MS
Mus musculus
12
Snap25
20614
Co-fractionation
Mus musculus
13
Gnao1
14681
Co-fractionation
Mus musculus
14
Slc6a1
Co-fractionation
Mus musculus
15
Cntnap2
Reconstituted Complex
Mus musculus
16
Tnr
Co-fractionation
Mus musculus
17
Tnc
21923
Co-fractionation
Mus musculus
View the network
image/svg+xml
Pathways in which Cntn1 is involved
No pathways found