Gene description for ARVCF
Gene name armadillo repeat gene deleted in velocardiofacial syndrome
Gene symbol ARVCF
Other names/aliases -
Species Homo sapiens
 Database cross references - ARVCF
ExoCarta ExoCarta_421
Vesiclepedia VP_421
Entrez Gene 421
HGNC 728
MIM 602269
UniProt O00192  
 ARVCF identified in sEVs derived from the following tissue/cell type
Colorectal cancer cells 17956143    
Ovarian cancer cells 23333927    
Ovarian cancer cells 23333927    
 Gene ontology annotations for ARVCF
Molecular Function
    protein binding GO:0005515 IPI
    cadherin binding GO:0045296 IBA
    cadherin binding GO:0045296 IPI
Biological Process
    mRNA processing GO:0006397 IEA
    cell adhesion GO:0007155 TAS
    RNA splicing GO:0008380 IMP
    cell-cell adhesion GO:0098609 IBA
Subcellular Localization
    nucleus GO:0005634 IBA
    nucleus GO:0005634 IDA
    cytoplasm GO:0005737 IBA
    cytoplasm GO:0005737 IDA
    plasma membrane GO:0005886 IBA
    adherens junction GO:0005912 IBA
    adherens junction GO:0005912 IDA
 Experiment description of studies that identified ARVCF in sEVs
1
Experiment ID 20
MISEV standards
EM
Biophysical techniques
HSP90|CD63|CD81|LAMP1
Enriched markers
GOLGA2|cytochrome c
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 17956143    
Organism Homo sapiens
Experiment description Proteomic analysis of microvesicles derived from human colorectal cancer cells.
Authors "Choi DS, Lee JM, Park GW, Lim HW, Bang JY, Kim YK, Kwon KH, Kwon HJ, Kim KP, Gho YS"
Journal name JPR
Publication year 2007
Sample Colorectal cancer cells
Sample name HT29
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Diafiltration
Flotation density 1.16 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [LTQ]
Western blotting
2
Experiment ID 211
MISEV standards
EM
Biophysical techniques
TSG101|Alix|EpCAM|TFRC
Enriched markers
cytochrome c|GOLGA2
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name IGROV1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
3
Experiment ID 212
MISEV standards
CEM
Biophysical techniques
TSG101|Alix|EpCAM|TFRC
Enriched markers
Cytochrome C|GOLGA2
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name OVCAR-3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for ARVCF
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 HNRNPH1 3187
Affinity Capture-RNA Homo sapiens
2 ANLN 54443
Affinity Capture-MS Homo sapiens
3 SLIRP 81892
Affinity Capture-MS Homo sapiens
4 CYSTM1 84418
Affinity Capture-MS Homo sapiens
5 EFNA4  
Affinity Capture-MS Homo sapiens
6 TACR1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
7 SDC1 6382
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
8 Cdh1 12550
Affinity Capture-MS Mus musculus
9 S1PR2 9294
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
10 ERBB2IP 55914
Reconstituted Complex Homo sapiens
11 CDH8  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
12 P4HA2 8974
Affinity Capture-MS Homo sapiens
13 CTNNB1 1499
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
14 S100A2 6273
Affinity Capture-MS Homo sapiens
15 CYP2S1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
16 NR3C1 2908
Proximity Label-MS Homo sapiens
17 CDH15 1013
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
18 C11orf52 91894
Proximity Label-MS Homo sapiens
19 CCDC85A  
Affinity Capture-MS Homo sapiens
20 CERS2 29956
Affinity Capture-MS Homo sapiens
21 GJB7  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
22 PROZ 8858
Affinity Capture-MS Homo sapiens
23 TAX1BP3 30851
Affinity Capture-MS Homo sapiens
24 CDH1 999
Proximity Label-MS Homo sapiens
25 CDH5  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
26 NTRK1 4914
Affinity Capture-MS Homo sapiens
27 GPR45  
Affinity Capture-MS Homo sapiens
28 SCML1  
Affinity Capture-MS Homo sapiens
29 CDH2 1000
Affinity Capture-MS Homo sapiens
30 EPHA2 1969
Proximity Label-MS Homo sapiens
31 ANK3  
Proximity Label-MS Homo sapiens
32 RHOB 388
Proximity Label-MS Homo sapiens
33 CPA5  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
34 KRAS 3845
Proximity Label-MS Homo sapiens
35 CTNNA3  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
36 SEMA4C 54910
Affinity Capture-MS Homo sapiens
37 CAV1 857
Proximity Label-MS Homo sapiens
38 CTDSPL 10217
Proximity Label-MS Homo sapiens
39 LNX1  
Two-hybrid Homo sapiens
40 CDH12  
Affinity Capture-MS Homo sapiens
41 PROSER2 254427
Affinity Capture-MS Homo sapiens
View the network image/svg+xml
 Pathways in which ARVCF is involved
No pathways found





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