Gene description for C20orf27
Gene name chromosome 20 open reading frame 27
Gene symbol C20orf27
Other names/aliases -
Species Homo sapiens
 Database cross references - C20orf27
ExoCarta ExoCarta_54976
Vesiclepedia VP_54976
Entrez Gene 54976
HGNC 15873
UniProt Q9GZN8  
 C20orf27 identified in sEVs derived from the following tissue/cell type
Hepatocellular carcinoma cells 26054723    
Hepatocytes 26054723    
 Gene ontology annotations for C20orf27
Molecular Function
    protein phosphatase 1 binding GO:0008157 IDA
Biological Process
    positive regulation of protein kinase A signaling GO:0010739 ISS
    positive regulation of transforming growth factor beta receptor signaling pathway GO:0030511 IMP
    glucose homeostasis GO:0042593 ISS
    positive regulation of non-canonical NF-kappaB signal transduction GO:1901224 IMP
    adaptive thermogenesis GO:1990845 ISS
Subcellular Localization
    cellular_component GO:0005575 ND
    extracellular space GO:0005615 ISS
 Experiment description of studies that identified C20orf27 in sEVs
1
Experiment ID 236
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name MHCC97L
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
2
Experiment ID 237
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocytes
Sample name MIHA
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RNA Sequencing
 Protein-protein interactions for C20orf27
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 UBE2H 7328
Affinity Capture-MS Homo sapiens
2 ARHGEF7 8874
Affinity Capture-MS Homo sapiens
3 RALYL 138046
Two-hybrid Homo sapiens
4 PLEKHA4 57664
Affinity Capture-MS Homo sapiens
5 PPP1CB 5500
Affinity Capture-MS Homo sapiens
6 PPP1R3A  
Affinity Capture-MS Homo sapiens
7 TMEM69  
Affinity Capture-MS Homo sapiens
8 CSK 1445
Co-fractionation Homo sapiens
9 PPP1CA 5499
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
10 EPB41L5 57669
Affinity Capture-MS Homo sapiens
11 CHEK2  
Co-fractionation Homo sapiens
12 PPP1CC 5501
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
13 XRCC6 2547
Proximity Label-MS Homo sapiens
14 DYNC1LI1 51143
Proximity Label-MS Homo sapiens
15 PHKB 5257
Two-hybrid Homo sapiens
16 TERF2  
Affinity Capture-MS Homo sapiens
17 BICD2 23299
Proximity Label-MS Homo sapiens
18 BICD1 636
Proximity Label-MS Homo sapiens
19 PPP1R7 5510
Affinity Capture-MS Homo sapiens
20 RPA3 6119
Proximity Label-MS Homo sapiens
21 SEC31A 22872
Co-fractionation Homo sapiens
22 FAM133A 286499
Affinity Capture-MS Homo sapiens
View the network image/svg+xml
 Pathways in which C20orf27 is involved
No pathways found





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