Gene description for Shank1
Gene name SH3/ankyrin domain gene 1
Gene symbol Shank1
Other names/aliases -
Species Mus musculus
 Database cross references - Shank1
ExoCarta ExoCarta_243961
Vesiclepedia VP_243961
Entrez Gene 243961
UniProt D3YZU1  
 Shank1 identified in sEVs derived from the following tissue/cell type
Pancreatic cells 19351151    
 Gene ontology annotations for Shank1
Molecular Function
    G protein-coupled receptor binding GO:0001664 ISO
    protein binding GO:0005515 IPI
    protein binding GO:0005515 ISS
    SH3 domain binding GO:0017124 ISO
    SH3 domain binding GO:0017124 ISS
    signaling receptor complex adaptor activity GO:0030159 ISO
    synaptic receptor adaptor activity GO:0030160 IBA
    synaptic receptor adaptor activity GO:0030160 IMP
    synaptic receptor adaptor activity GO:0030160 ISO
    somatostatin receptor binding GO:0031877 ISO
    somatostatin receptor binding GO:0031877 ISS
    ionotropic glutamate receptor binding GO:0035255 IBA
    ionotropic glutamate receptor binding GO:0035255 IPI
    ionotropic glutamate receptor binding GO:0035255 ISO
    identical protein binding GO:0042802 ISO
    identical protein binding GO:0042802 ISS
    protein-containing complex binding GO:0044877 ISO
    protein-containing complex binding GO:0044877 ISS
    ankyrin repeat binding GO:0071532 ISO
    ankyrin repeat binding GO:0071532 ISS
    scaffold protein binding GO:0097110 ISO
    scaffold protein binding GO:0097110 ISS
    structural constituent of postsynaptic density GO:0098919 IDA
    structural constituent of postsynaptic density GO:0098919 IEP
    structural constituent of postsynaptic density GO:0098919 IMP
Biological Process
    long-term memory GO:0007616 IMP
    associative learning GO:0008306 IMP
    adult behavior GO:0030534 IEA
    adult behavior GO:0030534 ISO
    negative regulation of actin filament bundle assembly GO:0032232 IDA
    social behavior GO:0035176 IMP
    social behavior GO:0035176 ISO
    protein localization to synapse GO:0035418 IMP
    olfactory behavior GO:0042048 IMP
    habituation GO:0046959 IMP
    modulation of chemical synaptic transmission GO:0050804 IDA
    modulation of chemical synaptic transmission GO:0050804 IEP
    modulation of chemical synaptic transmission GO:0050804 IMP
    neuromuscular process controlling balance GO:0050885 IMP
    determination of affect GO:0050894 IEA
    determination of affect GO:0050894 ISO
    righting reflex GO:0060013 IMP
    synapse maturation GO:0060074 ISO
    synapse maturation GO:0060074 ISS
    dendritic spine morphogenesis GO:0060997 IMP
    positive regulation of dendritic spine development GO:0060999 ISO
    positive regulation of dendritic spine development GO:0060999 ISS
    protein-containing complex assembly GO:0065003 ISO
    protein-containing complex assembly GO:0065003 ISS
    vocalization behavior GO:0071625 IMP
    vocalization behavior GO:0071625 ISO
    maintenance of postsynaptic density structure GO:0099562 IEA
    regulation of AMPA receptor activity GO:2000311 IMP
    positive regulation of excitatory postsynaptic potential GO:2000463 IMP
Subcellular Localization
    cytoplasm GO:0005737 IEA
    plasma membrane GO:0005886 IDA
    plasma membrane GO:0005886 ISO
    postsynaptic density GO:0014069 IBA
    postsynaptic density GO:0014069 IDA
    postsynaptic density GO:0014069 IDA
    postsynaptic density GO:0014069 ISO
    postsynaptic density GO:0014069 ISS
    membrane GO:0016020 ISO
    dendrite GO:0030425 IDA
    neuron projection GO:0043005 IDA
    dendritic spine GO:0043197 IBA
    dendritic spine GO:0043197 IDA
    dendritic spine GO:0043197 ISO
    synapse GO:0045202 ISO
    postsynaptic membrane GO:0045211 IBA
    postsynaptic membrane GO:0045211 IDA
    postsynaptic membrane GO:0045211 IDA
    postsynaptic membrane GO:0045211 ISO
    excitatory synapse GO:0060076 IDA
    Schaffer collateral - CA1 synapse GO:0098685 IDA
    Schaffer collateral - CA1 synapse GO:0098685 IEP
    Schaffer collateral - CA1 synapse GO:0098685 IMP
    glutamatergic synapse GO:0098978 IDA
    glutamatergic synapse GO:0098978 IEP
    glutamatergic synapse GO:0098978 IMP
 Experiment description of studies that identified Shank1 in sEVs
1
Experiment ID 188
MISEV standards
EM
Biophysical techniques
GAPDH|UCHL1|HSP90
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 19351151    
Organism Mus musculus
Experiment description Characterization of vesicles secreted from insulinoma NIT-1 cells.
Authors "Lee HS, Jeong J, Lee KJ."
Journal name J Proteome Res
Publication year 2009
Sample Pancreatic cells
Sample name Pancreatic beta cell (NIT-1)
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for Shank1
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Kctd13  
Affinity Capture-MS Mus musculus
2 Syngap1  
Affinity Capture-MS Mus musculus
Affinity Capture-MS Mus musculus
Affinity Capture-MS Mus musculus
3 Cyfip1 20430
Affinity Capture-MS Mus musculus
4 Cyfip2 76884
Affinity Capture-MS Mus musculus
5 Pde4dip  
Affinity Capture-MS Mus musculus
6 Agap2  
Affinity Capture-MS Mus musculus
7 Tnik  
Affinity Capture-MS Mus musculus
8 Dlg4  
Affinity Capture-MS Mus musculus
Affinity Capture-MS Mus musculus
9 SQSTM1 8878
Reconstituted Complex Homo sapiens
10 Bai2  
Co-fractionation Mus musculus
11 Shank3  
Affinity Capture-MS Mus musculus
Affinity Capture-MS Mus musculus
12 Homer1  
Affinity Capture-MS Mus musculus
13 Lphn1  
Co-fractionation Mus musculus
14 Dlgap1  
Affinity Capture-MS Mus musculus
Affinity Capture-MS Mus musculus
Co-fractionation Mus musculus
View the network image/svg+xml
 Pathways in which Shank1 is involved
PathwayEvidenceSource
Neurexins and neuroligins IEA Reactome
Neuronal System IEA Reactome
Protein-protein interactions at synapses IEA Reactome





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