Gene description for Psen1
Gene name presenilin 1
Gene symbol Psen1
Other names/aliases -
Species Rattus norvegicus
 Database cross references - Psen1
ExoCarta ExoCarta_29192
Vesiclepedia VP_29192
Entrez Gene 29192
UniProt P97887  
 Psen1 identified in sEVs derived from the following tissue/cell type
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
 Gene ontology annotations for Psen1
Molecular Function
    endopeptidase activity GO:0004175 IDA
    endopeptidase activity GO:0004175 ISO
    aspartic-type endopeptidase activity GO:0004190 ISO
    calcium channel activity GO:0005262 ISO
    protein binding GO:0005515 IPI
    beta-catenin binding GO:0008013 ISO
    peptidase activity GO:0008233 IDA
    PDZ domain binding GO:0030165 ISO
    aspartic endopeptidase activity, intramembrane cleaving GO:0042500 IBA
    aspartic endopeptidase activity, intramembrane cleaving GO:0042500 ISO
    aspartic endopeptidase activity, intramembrane cleaving GO:0042500 ISO
    aspartic endopeptidase activity, intramembrane cleaving GO:0042500 ISS
    cadherin binding GO:0045296 ISO
    ATPase binding GO:0051117 ISO
    growth factor receptor binding GO:0070851 ISO
Biological Process
    autophagosome assembly GO:0000045 ISO
    negative regulation of transcription by RNA polymerase II GO:0000122 ISO
    blood vessel development GO:0001568 ISO
    cell fate specification GO:0001708 ISO
    somitogenesis GO:0001756 ISO
    neuron migration GO:0001764 ISO
    positive regulation of receptor recycling GO:0001921 ISO
    negative regulation of protein phosphorylation GO:0001933 ISO
    positive regulation of protein phosphorylation GO:0001934 ISO
    heart looping GO:0001947 ISO
    positive regulation of L-glutamate import across plasma membrane GO:0002038 ISO
    hematopoietic progenitor cell differentiation GO:0002244 ISO
    astrocyte activation involved in immune response GO:0002265 ISO
    T cell activation involved in immune response GO:0002286 ISO
    myeloid leukocyte differentiation GO:0002573 ISO
    neural retina development GO:0003407 IEP
    negative regulation of protein kinase activity GO:0006469 ISO
    protein glycosylation GO:0006486 ISO
    membrane protein ectodomain proteolysis GO:0006509 IBA
    membrane protein ectodomain proteolysis GO:0006509 IMP
    membrane protein ectodomain proteolysis GO:0006509 ISO
    membrane protein ectodomain proteolysis GO:0006509 ISS
    mitochondrial transport GO:0006839 ISO
    intracellular calcium ion homeostasis GO:0006874 ISO
    autophagy GO:0006914 ISO
    DNA damage response GO:0006974 ISO
    DNA damage response GO:0006974 ISO
    response to oxidative stress GO:0006979 ISO
    negative regulation of epidermal growth factor-activated receptor activity GO:0007175 ISO
    regulation of epidermal growth factor-activated receptor activity GO:0007176 ISO
    Notch signaling pathway GO:0007219 IBA
    Notch signaling pathway GO:0007219 ISO
    Notch receptor processing GO:0007220 ISO
    Notch receptor processing GO:0007220 ISO
    brain development GO:0007420 ISO
    heart development GO:0007507 ISO
    learning or memory GO:0007611 ISO
    learning or memory GO:0007611 ISO
    memory GO:0007613 ISO
    memory GO:0007613 ISO
    post-embryonic development GO:0009791 ISO
    gene expression GO:0010467 ISO
    regulation of gene expression GO:0010468 ISO
    positive regulation of gene expression GO:0010628 ISO
    negative regulation of gene expression GO:0010629 ISO
    regulation of neuron projection development GO:0010975 ISO
    regulation of neuron projection development GO:0010975 ISS
    protein transport GO:0015031 ISO
    choline transport GO:0015871 ISO
    synaptic vesicle targeting GO:0016080 ISO
    protein processing GO:0016485 IBA
    protein processing GO:0016485 IDA
    protein processing GO:0016485 ISO
    protein processing GO:0016485 ISO
    protein processing GO:0016485 ISS
    cerebellum development GO:0021549 IEP
    cerebral cortex cell migration GO:0021795 ISO
    Cajal-Retzius cell differentiation GO:0021870 ISO
    dorsal/ventral neural tube patterning GO:0021904 ISO
    cerebral cortex development GO:0021987 ISO
    neurogenesis GO:0022008 ISO
    neuron differentiation GO:0030182 ISO
    embryonic limb morphogenesis GO:0030326 ISO
    forebrain development GO:0030900 ISO
    positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0032436 ISO
    endoplasmic reticulum calcium ion homeostasis GO:0032469 ISO
    endoplasmic reticulum calcium ion homeostasis GO:0032469 ISO
    endoplasmic reticulum calcium ion homeostasis GO:0032469 ISS
    positive regulation of tumor necrosis factor production GO:0032760 ISO
    amyloid-beta formation GO:0034205 IBA
    amyloid-beta formation GO:0034205 ISO
    amyloid-beta formation GO:0034205 ISO
    amyloid-beta formation GO:0034205 ISS
    segmentation GO:0035282 ISO
    intracellular signal transduction GO:0035556 IEA
    locomotion GO:0040011 ISO
    positive regulation of protein import into nucleus GO:0042307 ISO
    regulation of phosphorylation GO:0042325 ISO
    eye photoreceptor cell development GO:0042462 NAS
    amyloid precursor protein metabolic process GO:0042982 ISO
    amyloid precursor protein metabolic process GO:0042982 ISS
    amyloid precursor protein catabolic process GO:0042987 ISO
    amyloid precursor protein catabolic process GO:0042987 ISO
    myeloid dendritic cell differentiation GO:0043011 ISO
    positive regulation of apoptotic process GO:0043065 ISO
    negative regulation of apoptotic process GO:0043066 IDA
    negative regulation of apoptotic process GO:0043066 ISO
    negative regulation of apoptotic process GO:0043066 ISO
    positive regulation of MAP kinase activity GO:0043406 ISO
    negative regulation of neuron apoptotic process GO:0043524 IMP
    skin morphogenesis GO:0043589 ISO
    positive regulation of glycolytic process GO:0045821 ISO
    positive regulation of protein kinase activity GO:0045860 ISO
    positive regulation of DNA-templated transcription GO:0045893 ISO
    astrocyte activation GO:0048143 ISO
    regulation of synaptic plasticity GO:0048167 ISO
    thymus development GO:0048538 ISO
    neuron development GO:0048666 ISO
    neuron development GO:0048666 ISO
    skeletal system morphogenesis GO:0048705 ISO
    brain morphogenesis GO:0048854 ISO
    amyloid-beta metabolic process GO:0050435 ISO
    epithelial cell proliferation GO:0050673 ISO
    negative regulation of axonogenesis GO:0050771 ISO
    synapse organization GO:0050808 ISO
    positive regulation of coagulation GO:0050820 ISO
    T cell receptor signaling pathway GO:0050852 ISO
    sequestering of calcium ion GO:0051208 ISO
    neuron apoptotic process GO:0051402 ISO
    negative regulation of ubiquitin-protein transferase activity GO:0051444 ISO
    smooth endoplasmic reticulum calcium ion homeostasis GO:0051563 ISO
    protein maturation GO:0051604 ISO
    regulation of synaptic transmission, glutamatergic GO:0051966 ISO
    calcium ion homeostasis GO:0055074 IBA
    regulation of resting membrane potential GO:0060075 ISO
    regulation of canonical Wnt signaling pathway GO:0060828 ISO
    regulation of canonical Wnt signaling pathway GO:0060828 ISS
    positive regulation of dendritic spine development GO:0060999 ISO
    neuron cellular homeostasis GO:0070050 ISO
    calcium ion transmembrane transport GO:0070588 IEA
    apoptotic signaling pathway GO:0097190 ISO
    cell-cell adhesion GO:0098609 ISO
    regulation of synaptic vesicle cycle GO:0098693 ISO
    L-glutamate import across plasma membrane GO:0098712 ISO
    regulation of postsynapse organization GO:0099175 ISO
    protein catabolic process at postsynapse GO:0140249 ISO
    cellular response to amyloid-beta GO:1904646 ISO
    positive regulation of amyloid fibril formation GO:1905908 ISO
    neuron projection maintenance GO:1990535 ISO
    negative regulation of ubiquitin-dependent protein catabolic process GO:2000059 ISO
    negative regulation of apoptotic signaling pathway GO:2001234 ISO
Subcellular Localization
    Golgi membrane GO:0000139 IEA
    kinetochore GO:0000776 ISO
    nucleus GO:0005634 ISO
    nuclear outer membrane GO:0005640 ISO
    nucleoplasm GO:0005654 IEA
    nucleoplasm GO:0005654 ISO
    cytoplasm GO:0005737 ISO
    mitochondrion GO:0005739 ISO
    mitochondrion GO:0005739 ISS
    mitochondrial inner membrane GO:0005743 IDA
    lysosomal membrane GO:0005765 IDA
    early endosome GO:0005769 IDA
    endoplasmic reticulum GO:0005783 ISO
    endoplasmic reticulum GO:0005783 ISS
    endoplasmic reticulum membrane GO:0005789 IEA
    smooth endoplasmic reticulum GO:0005790 ISO
    rough endoplasmic reticulum GO:0005791 ISO
    Golgi apparatus GO:0005794 ISO
    Golgi apparatus GO:0005794 ISS
    centrosome GO:0005813 ISO
    plasma membrane GO:0005886 ISO
    plasma membrane GO:0005886 ISS
    cell cortex GO:0005938 ISO
    synaptic vesicle GO:0008021 IDA
    cell surface GO:0009986 IDA
    membrane GO:0016020 ISO
    membrane GO:0016020 ISS
    aggresome GO:0016235 ISO
    aggresome GO:0016235 ISS
    cell junction GO:0030054 ISO
    axon GO:0030424 ISO
    dendrite GO:0030425 ISO
    dendrite GO:0030425 ISO
    growth cone GO:0030426 ISO
    growth cone GO:0030426 ISS
    cytoplasmic vesicle GO:0031410 ISO
    neuromuscular junction GO:0031594 IDA
    early endosome membrane GO:0031901 IEA
    nuclear membrane GO:0031965 ISO
    protein-containing complex GO:0032991 IDA
    protein-containing complex GO:0032991 ISO
    ciliary rootlet GO:0035253 ISO
    sarcolemma GO:0042383 IDA
    presynaptic membrane GO:0042734 IDA
    neuron projection GO:0043005 ISO
    neuronal cell body GO:0043025 ISO
    dendritic shaft GO:0043198 ISO
    membrane raft GO:0045121 ISO
    gamma-secretase complex GO:0070765 IBA
    gamma-secretase complex GO:0070765 ISO
    gamma-secretase complex GO:0070765 ISS
    synaptic membrane GO:0097060 IDA
    postsynapse GO:0098794 IEA
    glutamatergic synapse GO:0098978 ISO
 Experiment description of studies that identified Psen1 in sEVs
1
Experiment ID 90
MISEV standards
EM
Biophysical techniques
HSC70|HSP90|TSG101|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E"
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
2
Experiment ID 96
MISEV standards
EM
Biophysical techniques
TSG101|HSP90|HSC70|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
3
Experiment ID 97
MISEV standards
EM
Biophysical techniques
TSG101|HSP90|HSC70|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
 Protein-protein interactions for Psen1
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Efnb2  
Affinity Capture-Western Rattus norvegicus
2 Erlin2 290823
Affinity Capture-Western Rattus norvegicus
Affinity Capture-Western Rattus norvegicus
3 Ngfr  
Affinity Capture-Western Rattus norvegicus
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