Gene description for Otub1
Gene name
OTU deubiquitinase, ubiquitin aldehyde binding 1
Gene symbol
Otub1
Other names/aliases
-
Species
Rattus norvegicus
Database cross references - Otub1
ExoCarta
ExoCarta_293705
Vesiclepedia
VP_293705
Entrez Gene
293705
UniProt
B2RYG6
Otub1 identified in sEVs derived from the following tissue/cell type
Reticulocytes
21828046
Reticulocytes
21828046
Gene ontology annotations for Otub1
Experiment description of studies that identified Otub1 in sEVs
1
Experiment ID
95
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP90|HSC70|MHCI
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry [Orbitrap]
PubMed ID
21828046
Organism
Rattus norvegicus
Experiment description
The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors
"Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name
JBC
Publication year
2011
Sample
Reticulocytes
Sample name
Reticulocytes - D7 Rep 1
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
1.13-1.25 g/mL
Molecules identified in the study
Protein Lipids
Methods used in the study
Mass spectrometry [QSTAR] Mass spectrometry [Orbitrap] Western blotting
2
Experiment ID
98
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP90|HSC70|MHCI
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry [Orbitrap]
PubMed ID
21828046
Organism
Rattus norvegicus
Experiment description
The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors
"Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name
JBC
Publication year
2011
Sample
Reticulocytes
Sample name
Reticulocytes - D7 Rep 2
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
1.13-1.25 g/mL
Molecules identified in the study
Protein Lipids
Methods used in the study
Mass spectrometry [QSTAR] Mass spectrometry [Orbitrap] Western blotting
Protein-protein interactions for Otub1
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
Dcn
29139
Affinity Capture-Western
Rattus norvegicus
Affinity Capture-Western
Rattus norvegicus
2
Itm2b
290364
Affinity Capture-MS
Rattus norvegicus
View the network
image/svg+xml
Pathways in which Otub1 is involved