Gene description for SNHG5
Gene name small nucleolar RNA host gene 5
Gene symbol SNHG5
Other names/aliases C6orf160
LINC00044
NCRNA00044
U50HG
bA33E24.2
Species Homo sapiens
 Database cross references - SNHG5
ExoCarta ExoCarta_387066
Vesiclepedia VP_387066
Entrez Gene 387066
HGNC 21026
MIM 613263
 SNHG5 identified in sEVs derived from the following tissue/cell type
Endothelial cells 26027894    
 Gene ontology annotations for SNHG5
 Experiment description of studies that identified SNHG5 in sEVs
1
Experiment ID 226
MISEV standards
EM
Biophysical techniques
GAPDH|CD9|FLOT1
Enriched markers
LMNA|H2AFX|ATP5A1|TOMM20
Negative markers
Particle analysis
Identified molecule lncRNA
Identification method Small RNA sequencing (Illumina HiSeq 2000 (Solexa)
PubMed ID 26027894    
Organism Homo sapiens
Experiment description "Quantitative and qualitative analysis of small RNAs in human endothelial cells and exosomes provides insights into localized RNA processing, degradation and sorting"
Authors "Bas W. M. van Balkom, Almut S. Eisele, D. Michiel Pegtel, Sander Bervoets, Marianne C. Verhaar"
Journal name Journal of Extracellular Vesicles
Publication year 2015
Sample Endothelial cells
Sample name HMEC-1
Isolation/purification methods Differential ultracentrifugation
Sucrose density gradient
Flotation density 1.10 g/mL
Molecules identified in the study miRNA
Protein
snoRNA
lncRNA
yRNA
snRNA
mRNA
ncRNA
mtRNA
vtRNA
scaRNA
lincRNA
Methods used in the study Small RNA sequencing (Illumina HiSeq 2000 (Solexa)
Western blotting
 Protein-protein interactions for SNHG5
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 APEX1 328
Affinity Capture-RNA Homo sapiens
View the network image/svg+xml
 Pathways in which SNHG5 is involved
No pathways found





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