Gene ontology annotations for Hspa1b
Experiment description of studies that identified Hspa1b in sEVs
1
Experiment ID
520
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✔
Negative markers
✔
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
34112803
Organism
Mus musculus
Experiment description
Tumor microenvironmental cytokines bound to cancer exosomes determine uptake by cytokine receptor-expressing cells and biodistribution
Authors
"Lima LG, Ham S, Shin H, Chai EPZ, Lek ESH, Lobb RJ, Müller AF, Mathivanan S, Yeo B, Choi Y, Parker BS, Möller A. "
Journal name
Nat Commun
Publication year
2021
Sample
Breast cancer cells
Sample name
EO771
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Size exclusion chromatography Centrifugal ultrafiltration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
521
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✔
Negative markers
✔
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
34112803
Organism
Mus musculus
Experiment description
Tumor microenvironmental cytokines bound to cancer exosomes determine uptake by cytokine receptor-expressing cells and biodistribution
Authors
"Lima LG, Ham S, Shin H, Chai EPZ, Lek ESH, Lobb RJ, Müller AF, Mathivanan S, Yeo B, Choi Y, Parker BS, Möller A. "
Journal name
Nat Commun
Publication year
2021
Sample
Breast cancer cells
Sample name
PyMT
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Size exclusion chromatography Centrifugal ultrafiltration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
73
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
18494037
Organism
Mus musculus
Experiment description
Difference gel electrophoresis analysis of Ras-transformed fibroblast cell-derived exosomes.
Authors
"Ji H, Erfani N, Tauro BJ, Kapp EA, Zhu HJ, Moritz RL, Lim JW, Simpson RJ"
Journal name
ELEC
Publication year
2008
Sample
Embryonic fibroblasts
Sample name
NIH3T3
Isolation/purification methods
Differential centrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [LCQ DECA] Western blotting
4
Experiment ID
695
MISEV standards
✘
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
34489604
Organism
Mus musculus
Experiment description
Hepatocyte-derived exosomes from early onset obese mice promote insulin sensitivity through miR-3075
Authors
"Ji Y, Luo Z, Gao H, Dos Reis FCG, Bandyopadhyay G, Jin Z, Manda KA, Isaac R, Yang M, Fu W, Ying W, Olefsky JM. "
Journal name
Nat Metab
Publication year
2021
Sample
Hepatocytes
Sample name
Primary hepatocytes - C57BL/6
Isolation/purification methods
Centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein miRNA
Methods used in the study
Western blotting Small RNA sequencing
5
Experiment ID
696
MISEV standards
✘
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
34489604
Organism
Mus musculus
Experiment description
Hepatocyte-derived exosomes from early onset obese mice promote insulin sensitivity through miR-3075
Authors
"Ji Y, Luo Z, Gao H, Dos Reis FCG, Bandyopadhyay G, Jin Z, Manda KA, Isaac R, Yang M, Fu W, Ying W, Olefsky JM. "
Journal name
Nat Metab
Publication year
2021
Sample
Hepatocytes
Sample name
Primary hepatocytes - C57BL/6
Isolation/purification methods
Centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein miRNA
Methods used in the study
Western blotting Small RNA sequencing
6
Experiment ID
697
MISEV standards
✘
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
34489604
Organism
Mus musculus
Experiment description
Hepatocyte-derived exosomes from early onset obese mice promote insulin sensitivity through miR-3075
Authors
"Ji Y, Luo Z, Gao H, Dos Reis FCG, Bandyopadhyay G, Jin Z, Manda KA, Isaac R, Yang M, Fu W, Ying W, Olefsky JM. "
Journal name
Nat Metab
Publication year
2021
Sample
Hepatocytes
Sample name
Primary hepatocytes - C57BL/6
Isolation/purification methods
Centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein miRNA
Methods used in the study
Western blotting Small RNA sequencing
7
Experiment ID
262
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✔
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
25242146
Organism
Mus musculus
Experiment description
Extracellular Vesicles from Neural Stem Cells Transfer IFN-? via Ifngr1 to Activate Stat1 Signaling in Target Cells
Authors
"Chiara Cossetti, Nunzio Iraci, Tim R. Mercer, Tommaso Leonardi, Emanuele Alpi, Denise Drago, Clara Alfaro-Cervello, Harpreet K. Saini, Matthew P. Davis, Julia Schaeffer, Beatriz Vega, Matilde Stefanini, CongJian Zhao, Werner Muller, Jose Manuel Garcia-Verdugo, Suresh Mathivanan, Angela Bachi, Anton J. Enright, John S. Mattick, Stefano Pluchino"
Journal name
Molecular Cell
Publication year
2014
Sample
Neural stem cells
Sample name
NPCs
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
1.13-1.20 g/mL
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry Microarray
8
Experiment ID
33
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
21136642
Organism
Mus musculus
Experiment description
Oligodendrocytes secrete exosomes containing major myelin and stress-protective proteins: Trophic support for axons?
Authors
"Kramer-Albers EM, Bretz N, Tenzer S, Winterstein C, Mobius W, Berger H, Nave KA, Schild H, Trotter J"
Journal name
PROTEOMICS_CL
Publication year
2007
Sample
Oligodendrocytes
Sample name
Oligodendrocytes Oli-neu
Isolation/purification methods
Differential centrifugation Sucrose density gradient
Flotation density
1.10-1.14 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [QTOF] Western blotting Immunoelectron Microscopy
9
Experiment ID
870
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
35173168
Organism
Mus musculus
Experiment description
Lin28B-high breast cancer cells promote immune suppression in the lung pre-metastatic niche via exosomes and support cancer progression
Authors
"Qi M, Xia Y, Wu Y, Zhang Z, Wang X, Lu L, Dai C, Song Y, Xu K, Ji W, Zhan L."
Journal name
Nat Commun
Publication year
2022
Sample
Serum
Sample name
BALB/c bearing 4T07 primary tumour
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
Western blotting RNA sequencing qRT-PCR
Protein-protein interactions for Hspa1b
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
Krt8
16691
Affinity Capture-Western
Mus musculus
2
Ighmbp2
20589
Affinity Capture-MS
Mus musculus
3
Nr3c1
Affinity Capture-Western
Mus musculus
4
SOD1
6647
Affinity Capture-MS
Homo sapiens
5
Hif1a
Affinity Capture-Western
Mus musculus
6
Il4ra
Affinity Capture-Western
Mus musculus
7
Trp53
Affinity Capture-Western
Mus musculus
8
Erg
Affinity Capture-Western
Mus musculus
9
DNAJB2
3300
Affinity Capture-Western
Homo sapiens
10
Stub1
56424
Affinity Capture-Western
Mus musculus
11
Foxp3
Affinity Capture-Western
Mus musculus
Affinity Capture-Western
Mus musculus
12
Hsp90ab1
15516
Reconstituted Complex
Mus musculus
13
Pfn1
18643
Affinity Capture-MS
Mus musculus
14
Htt
Affinity Capture-Western
Mus musculus
Affinity Capture-Western
Mus musculus
15
Mllt3
Affinity Capture-Western
Mus musculus
16
Bag4
Affinity Capture-Western
Mus musculus
17
Bag3
Affinity Capture-Western
Mus musculus
18
Dnajb6
23950
Affinity Capture-Western
Mus musculus
19
Mt3
Affinity Capture-MS
Mus musculus
20
Ppp1ca
19045
Affinity Capture-Western
Mus musculus
21
Atxn3
Affinity Capture-Western
Mus musculus
22
GZMB
Biochemical Activity
Homo sapiens
23
Grin2b
Affinity Capture-Western
Mus musculus
24
DYX1C1
Affinity Capture-Western
Homo sapiens
25
Traf6
Affinity Capture-Western
Mus musculus
26
Epm2a
Affinity Capture-Western
Mus musculus
27
Ppp1cc
19047
Affinity Capture-Western
Mus musculus
28
Grin1
Affinity Capture-Western
Mus musculus
29
Ikbkg
Affinity Capture-MS
Mus musculus
Affinity Capture-Western
Mus musculus
30
Lnx1
Affinity Capture-MS
Mus musculus
31
Kcnb1
Affinity Capture-Western
Mus musculus
32
Bag5
70369
Affinity Capture-Western
Mus musculus
33
ACTB
60
Reconstituted Complex
Homo sapiens
34
Nhlrc1
Affinity Capture-Western
Mus musculus
35
Ppp1cb
19046
Affinity Capture-Western
Mus musculus
36
HIST1H3A
8350
Affinity Capture-MS
Homo sapiens
37
Pfn2
Affinity Capture-MS
Mus musculus
38
Socs1
Co-fractionation
Mus musculus
View the network
image/svg+xml
Pathways in which Hspa1b is involved