Gene description for SPRED1
Gene name sprouty-related, EVH1 domain containing 1
Gene symbol SPRED1
Other names/aliases NFLS
PPP1R147
hSpred1
spred-1
Species Homo sapiens
 Database cross references - SPRED1
ExoCarta ExoCarta_161742
Vesiclepedia VP_161742
Entrez Gene 161742
HGNC 20249
MIM 609291
UniProt Q7Z699  
 SPRED1 identified in sEVs derived from the following tissue/cell type
Endothelial cells 26027894    
 Gene ontology annotations for SPRED1
Molecular Function
    stem cell factor receptor binding GO:0005173 ISS
    protein binding GO:0005515 IPI
    protein kinase binding GO:0019901 IBA
    protein kinase binding GO:0019901 IPI
    phosphatase binding GO:0019902 IDA
    protein serine/threonine kinase inhibitor activity GO:0030291 ISS
Biological Process
    negative regulation of protein kinase activity GO:0006469 IDA
    negative regulation of epithelial to mesenchymal transition GO:0010719 ISS
    negative regulation of peptidyl-threonine phosphorylation GO:0010801 IMP
    negative regulation of angiogenesis GO:0016525 IMP
    negative regulation of transforming growth factor beta receptor signaling pathway GO:0030512 ISS
    regulation of MAPK cascade GO:0043408 TAS
    negative regulation of MAPK cascade GO:0043409 IMP
    positive regulation of DNA damage response, signal transduction by p53 class mediator GO:0043517 ISS
    vasculogenesis involved in coronary vascular morphogenesis GO:0060979 IMP
    negative regulation of ERK1 and ERK2 cascade GO:0070373 IBA
    negative regulation of ERK1 and ERK2 cascade GO:0070373 ISS
    negative regulation of cell migration involved in sprouting angiogenesis GO:0090051 IEA
    regulation of protein deacetylation GO:0090311 ISS
    negative regulation of lens fiber cell differentiation GO:1902747 ISS
Subcellular Localization
    nucleoplasm GO:0005654 IDA
    cytosol GO:0005829 IDA
    cytosol GO:0005829 TAS
    plasma membrane GO:0005886 IBA
    plasma membrane GO:0005886 ISS
    plasma membrane GO:0005886 TAS
    caveola GO:0005901 IEA
    cytoplasmic vesicle GO:0031410 IDA
 Experiment description of studies that identified SPRED1 in sEVs
1
Experiment ID 226
MISEV standards
EM
Biophysical techniques
GAPDH|CD9|FLOT1
Enriched markers
LMNA|H2AFX|ATP5A1|TOMM20
Negative markers
Particle analysis
Identified molecule mRNA
Identification method Small RNA sequencing (Illumina HiSeq 2000 (Solexa)
PubMed ID 26027894    
Organism Homo sapiens
Experiment description "Quantitative and qualitative analysis of small RNAs in human endothelial cells and exosomes provides insights into localized RNA processing, degradation and sorting"
Authors "Bas W. M. van Balkom, Almut S. Eisele, D. Michiel Pegtel, Sander Bervoets, Marianne C. Verhaar"
Journal name Journal of Extracellular Vesicles
Publication year 2015
Sample Endothelial cells
Sample name HMEC-1
Isolation/purification methods Differential ultracentrifugation
Sucrose density gradient
Flotation density 1.10 g/mL
Molecules identified in the study miRNA
Protein
snoRNA
lncRNA
yRNA
snRNA
mRNA
ncRNA
mtRNA
vtRNA
scaRNA
lincRNA
Methods used in the study Small RNA sequencing (Illumina HiSeq 2000 (Solexa)
Western blotting
 Protein-protein interactions for SPRED1
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 NAGK 55577
Two-hybrid Homo sapiens
2 MAB21L3  
Two-hybrid Homo sapiens
3 HPCAL4  
Two-hybrid Homo sapiens
4 VSNL1 7447
Two-hybrid Homo sapiens
5 CCDC185  
Two-hybrid Homo sapiens
6 C2orf68  
Two-hybrid Homo sapiens
7 FAM118B  
Two-hybrid Homo sapiens
8 NCALD 83988
Two-hybrid Homo sapiens
9 ZDHHC17 23390
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
10 PPP1CA 5499
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
11 BLZF1  
Two-hybrid Homo sapiens
12 PIH1D2  
Two-hybrid Homo sapiens
13 BEX2  
Two-hybrid Homo sapiens
14 OSGEP 55644
Two-hybrid Homo sapiens
15 IL16  
Two-hybrid Homo sapiens
16 CDKN1A  
Two-hybrid Homo sapiens
17 FAM90A1  
Two-hybrid Homo sapiens
18 ELAVL1 1994
Affinity Capture-RNA Homo sapiens
19 CREB5 9586
Two-hybrid Homo sapiens
20 MCAM 4162
Proximity Label-MS Homo sapiens
21 ZNF655  
Two-hybrid Homo sapiens
22 MEOX2  
Two-hybrid Homo sapiens
23 TTC19  
Two-hybrid Homo sapiens
24 HEXIM2  
Two-hybrid Homo sapiens
25 TSC22D1 8848
Two-hybrid Homo sapiens
26 ZNF408  
Two-hybrid Homo sapiens
27 TESK1 7016
Affinity Capture-Western Homo sapiens
28 RIN1 9610
Two-hybrid Homo sapiens
29 GLYCTK  
Two-hybrid Homo sapiens
30 CDH1 999
Proximity Label-MS Homo sapiens
31 FBXW7  
Synthetic Lethality Homo sapiens
32 ZNF587  
Two-hybrid Homo sapiens
33 SUV39H1  
Two-hybrid Homo sapiens
34 PRPF18  
Two-hybrid Homo sapiens
35 HSF2BP  
Two-hybrid Homo sapiens
36 AQP1 358
Two-hybrid Homo sapiens
37 ZNF417  
Two-hybrid Homo sapiens
38 DNAJB11 51726
Two-hybrid Homo sapiens
39 RCC1 1104
Two-hybrid Homo sapiens
View the network image/svg+xml



Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here