Gene description for Pdhb
Gene name
pyruvate dehydrogenase (lipoamide) beta
Gene symbol
Pdhb
Other names/aliases
2610103L06Rik AL024199 C81408
Species
Mus musculus
Database cross references - Pdhb
ExoCarta
ExoCarta_68263
Vesiclepedia
VP_68263
Entrez Gene
68263
UniProt
Q9D051
Pdhb identified in sEVs derived from the following tissue/cell type
Melanoma cells
34957415
Melanoma cells
34957415
Gene ontology annotations for Pdhb
Experiment description of studies that identified Pdhb in sEVs
1
Experiment ID
1117
MISEV standards
✘
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✔
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
34957415
Organism
Mus musculus
Experiment description
Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism
Authors
"GarcÃa-Silva S, Benito-MartÃn A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÃ, Torres-Ruiz R, RodrÃguez-Perales S, MartÃnez L, Pérez-MartÃnez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, MartÃnez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, MegÃas D, Mehrara BJ, Lyden D, Peinado H."
Journal name
Nat Cancer
Publication year
2021
Sample
Melanoma cells
Sample name
B16-F1R2
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
2
Experiment ID
1118
MISEV standards
✘
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✔
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
34957415
Organism
Mus musculus
Experiment description
Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism
Authors
"GarcÃa-Silva S, Benito-MartÃn A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÃ, Torres-Ruiz R, RodrÃguez-Perales S, MartÃnez L, Pérez-MartÃnez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, MartÃnez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, MegÃas D, Mehrara BJ, Lyden D, Peinado H."
Journal name
Nat Cancer
Publication year
2021
Sample
Melanoma cells
Sample name
B16-F1R2
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
Protein-protein interactions for Pdhb
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
Tia1
Affinity Capture-MS
Mus musculus
2
Chchd3
Co-fractionation
Mus musculus
3
Pdha2
Cross-Linking-MS (XL-MS)
Mus musculus
4
Sdha
66945
Co-fractionation
Mus musculus
5
Atxn1
Affinity Capture-MS
Mus musculus
6
Pdha1
Cross-Linking-MS (XL-MS)
Mus musculus
Cross-Linking-MS (XL-MS)
Mus musculus
Cross-Linking-MS (XL-MS)
Mus musculus
7
Atp5a1
11946
Co-fractionation
Mus musculus
8
Kctd13
Affinity Capture-MS
Mus musculus
9
Uqcrc2
67003
Co-fractionation
Mus musculus
10
Ndufab1
Co-fractionation
Mus musculus
11
Mapt
Affinity Capture-MS
Mus musculus
12
Atg16l1
Affinity Capture-MS
Mus musculus
13
HSD17B10
3028
Affinity Capture-MS
Homo sapiens
14
Idh3g
Co-fractionation
Mus musculus
15
Sucla2
Co-fractionation
Mus musculus
16
Nanog
Affinity Capture-MS
Mus musculus
17
Fancd2
Affinity Capture-MS
Mus musculus
18
Ywhaz
22631
Affinity Capture-MS
Mus musculus
19
Suclg1
Co-fractionation
Mus musculus
20
Kcnma1
Affinity Capture-MS
Mus musculus
View the network
image/svg+xml
Pathways in which Pdhb is involved