ExoCarta: Gene summary

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Gene description for SNRPF
Gene name	small nuclear ribonucleoprotein polypeptide F
Gene symbol	SNRPF
Other names/aliases	SMF Sm-F snRNP-F
Species	Homo sapiens
Database cross references - SNRPF
ExoCarta	ExoCarta_6636
Vesiclepedia	VP_6636
Entrez Gene	6636
HGNC	11162
MIM	603541
UniProt	P62306
SNRPF identified in sEVs derived from the following tissue/cell type
Bone marrow mesenchymal stem cells	36408942
Bone marrow mesenchymal stem cells	36408942
Bone marrow mesenchymal stem cells	36408942
Bone marrow mesenchymal stem cells	36408942
Thymus	23844026

Gene ontology annotations for SNRPF

Molecular Function
	RNA binding	GO:0003723	IBA
	RNA binding	GO:0003723	IMP
	protein binding	GO:0005515	IPI
Biological Process
	spliceosomal snRNP assembly	GO:0000387	IDA
	mRNA splicing, via spliceosome	GO:0000398	IBA
	mRNA splicing, via spliceosome	GO:0000398	IC
	mRNA splicing, via spliceosome	GO:0000398	IDA
	mRNA splicing, via spliceosome	GO:0000398	NAS
	RNA splicing	GO:0008380	IMP
	7-methylguanosine cap hypermethylation	GO:0036261	NAS
	U2-type prespliceosome assembly	GO:1903241	NAS
Subcellular Localization
	nucleus	GO:0005634	IDA
	nucleus	GO:0005634	NAS
	nucleoplasm	GO:0005654	TAS
	spliceosomal complex	GO:0005681	IDA
	spliceosomal complex	GO:0005681	IPI
	spliceosomal complex	GO:0005681	NAS
	U5 snRNP	GO:0005682	NAS
	U7 snRNP	GO:0005683	IDA
	U2-type spliceosomal complex	GO:0005684	IDA
	U1 snRNP	GO:0005685	IBA
	U1 snRNP	GO:0005685	IDA
	U1 snRNP	GO:0005685	IPI
	U1 snRNP	GO:0005685	NAS
	U2 snRNP	GO:0005686	NAS
	U4 snRNP	GO:0005687	IDA
	U4 snRNP	GO:0005687	NAS
	U12-type spliceosomal complex	GO:0005689	IDA
	cytosol	GO:0005829	IDA
	cytosol	GO:0005829	TAS
	small nuclear ribonucleoprotein complex	GO:0030532	IDA
	methylosome	GO:0034709	IDA
	pICln-Sm protein complex	GO:0034715	IBA
	pICln-Sm protein complex	GO:0034715	IDA
	SMN-Sm protein complex	GO:0034719	IDA
	U4/U6 x U5 tri-snRNP complex	GO:0046540	IDA
	U4/U6 x U5 tri-snRNP complex	GO:0046540	IPI
	U2-type precatalytic spliceosome	GO:0071005	IDA
	U2-type catalytic step 2 spliceosome	GO:0071007	IDA
	catalytic step 2 spliceosome	GO:0071013	IBA
	catalytic step 2 spliceosome	GO:0071013	IDA

Experiment description of studies that identified SNRPF in sEVs

Experiment ID

489

MISEV standards
✔	Biophysical techniques
✔	Enriched markers
✔	Negative markers
✔	Particle analysis

Identified molecule

Protein

Identification method

Mass spectrometry

PubMed ID

36408942

Organism

Rattus norvegicus

Experiment description

Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells

Authors

"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."

Journal name

Proteomics

Publication year

2023

Sample

Bone marrow mesenchymal stem cells

Sample name

BMSC - Passage 6

Isolation/purification methods

Differential centrifugation
Filtration
Ultracentrifugation

Flotation density

Molecules identified in the study

Protein

Methods used in the study

Western blotting
Mass spectometry

Experiment ID

490

MISEV standards
✔	Biophysical techniques
✔	Enriched markers
✔	Negative markers
✔	Particle analysis

Identified molecule

Protein

Identification method

Mass spectrometry

PubMed ID

36408942

Organism

Rattus norvegicus

Experiment description

Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells

Authors

"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."

Journal name

Proteomics

Publication year

2023

Sample

Bone marrow mesenchymal stem cells

Sample name

BMSC - Passage 7

Isolation/purification methods

Differential centrifugation
Filtration
Ultracentrifugation

Flotation density

Molecules identified in the study

Protein

Methods used in the study

Western blotting
Mass spectometry

Experiment ID

491

MISEV standards
✔	Biophysical techniques
✔	Enriched markers
✔	Negative markers
✔	Particle analysis

Identified molecule

Protein

Identification method

Mass spectrometry

PubMed ID

36408942

Organism

Rattus norvegicus

Experiment description

Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells

Authors

"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."

Journal name

Proteomics

Publication year

2023

Sample

Bone marrow mesenchymal stem cells

Sample name

BMSC - Passage 8

Isolation/purification methods

Differential centrifugation
Filtration
Ultracentrifugation

Flotation density

Molecules identified in the study

Protein

Methods used in the study

Western blotting
Mass spectometry

Experiment ID

492

MISEV standards
✔	Biophysical techniques
✔	Enriched markers
✔	Negative markers
✔	Particle analysis

Identified molecule

Protein

Identification method

Mass spectrometry

PubMed ID

36408942

Organism

Rattus norvegicus

Experiment description

Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells

Authors

"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."

Journal name

Proteomics

Publication year

2023

Sample

Bone marrow mesenchymal stem cells

Sample name

BMSC - Passage 9

Isolation/purification methods

Differential centrifugation
Filtration
Ultracentrifugation

Flotation density

Molecules identified in the study

Protein

Methods used in the study

Western blotting
Mass spectometry

Experiment ID

217

MISEV standards
✔	Biophysical techniques
✔	Enriched markers
✘	Negative markers
✔	Particle analysis

Identified molecule

protein

Identification method

Mass spectrometry

PubMed ID

23844026

Organism

Homo sapiens

Experiment description

Characterization of human thymic exosomes.

Authors

"Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."

Journal name

PLoS One

Publication year

2013

Sample

Thymus

Sample name

Normal-Thymus

Isolation/purification methods

Differential centrifugation
Filtration
Ultracentrifugation

Flotation density

Molecules identified in the study

Protein

Methods used in the study

Mass spectrometry

Protein-protein interactions for SNRPF

Protein Interactor

ExoCarta ID

Identification method

PubMed

Species

IWS1

Affinity Capture-MS

Homo sapiens

CRBN

Affinity Capture-MS

Homo sapiens

POLR2G

5436

Affinity Capture-MS

Homo sapiens

SLFN11

91607

Affinity Capture-MS

Homo sapiens

RIT1

6016

Negative Genetic

Homo sapiens

HOMER3

9454

Two-hybrid

Homo sapiens

UBE2H

7328

Affinity Capture-MS

Homo sapiens

HNRNPC

3183

Affinity Capture-MS

Homo sapiens

PARD3B

117583

Affinity Capture-MS

Homo sapiens

AKAP7

9465

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

POLDIP3

84271

Two-hybrid

Homo sapiens

SUPT6H

6830

Affinity Capture-MS

Homo sapiens

SNRPG

6637

Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Two-hybrid		Homo sapiens

SNRPE

6635

Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens
Co-fractionation		Homo sapiens
Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens

COIL

Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens

DNAJC8

22826

Affinity Capture-MS

Homo sapiens

CST5

1473

Affinity Capture-MS

Homo sapiens

RBM22

55696

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

BCLAF1

9774

Affinity Capture-MS

Homo sapiens

HIST1H4A

8359

Affinity Capture-MS

Homo sapiens

WDR61

80349

Affinity Capture-MS

Homo sapiens

PPIE

10450

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

SRPK2

6733

Affinity Capture-MS

Homo sapiens

TOX4

Affinity Capture-MS

Homo sapiens

NCDN

23154

Affinity Capture-MS

Homo sapiens

TGS1

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

ZC3H14

Affinity Capture-MS

Homo sapiens

SF3B1

23451

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

LUC7L

55692

Affinity Capture-MS

Homo sapiens

LSM11

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

LSM4

25804

Affinity Capture-MS

Homo sapiens

GEMIN8

54960

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

SSB

6741

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

PRPF3

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

POLR2I

5438

Affinity Capture-MS

Homo sapiens

CAND1

55832

Affinity Capture-MS

Homo sapiens

AAR2

25980

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

AQR

9716

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

SYF2

Affinity Capture-MS

Homo sapiens

PPP1R10

Affinity Capture-MS

Homo sapiens

WDR26

80232

Affinity Capture-MS

Homo sapiens

SNRPD2

6633

Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens
Co-fractionation		Homo sapiens
Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Cross-Linking-MS (XL-MS)		Homo sapiens
Cross-Linking-MS (XL-MS)		Homo sapiens
Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

SF3B5

83443

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

LSM10

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

ILF2

3608

Affinity Capture-MS

Homo sapiens

CWF19L2

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

ERH

2079

Affinity Capture-MS

Homo sapiens

Lsm3

Two-hybrid

Mus musculus

CAPZB

832

Affinity Capture-MS

Homo sapiens

DDX23

9416

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

TROVE2

6738

Affinity Capture-MS

Homo sapiens

PLEKHG4

Affinity Capture-MS

Homo sapiens

S100A4

6275

Co-fractionation

Homo sapiens

SNRNP70

6625

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

ZBTB2

57621

Affinity Capture-MS

Homo sapiens

USP39

10713

Affinity Capture-MS

Homo sapiens

TBCB

1155

Co-fractionation

Homo sapiens

POLR2E

5434

Affinity Capture-MS

Homo sapiens

GPATCH1

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

PSMA3

5684

Two-hybrid

Homo sapiens

WDR20

91833

Affinity Capture-MS

Homo sapiens

CMTR2

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

ISY1

57461

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

TCERG1

10915

Affinity Capture-MS

Homo sapiens

WDR83

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

SMR3B

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

SEC24C

9632

Co-fractionation

Homo sapiens

COPS5

10987

Affinity Capture-MS

Homo sapiens

FBXW7

Synthetic Lethality

Homo sapiens

LUC7L3

51747

Affinity Capture-MS

Homo sapiens

POLR2L

5441

Affinity Capture-MS

Homo sapiens

CPSF7

79869

Two-hybrid

Homo sapiens

SRRM2

23524

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

SNRPC

6631

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

SMU1

55234

Affinity Capture-MS

Homo sapiens

IFIT3

3437

Affinity Capture-MS

Homo sapiens

TFIP11

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

SF3A2

8175

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

Snrnp70

20637

Affinity Capture-MS

Mus musculus

ABCE1

6059

Affinity Capture-MS

Homo sapiens

RSRC1

Affinity Capture-MS

Homo sapiens

SNRNP48

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

SMEK1

55671

Affinity Capture-MS

Homo sapiens

ARHGAP19

Affinity Capture-MS

Homo sapiens

SNRPD3

6634

Co-fractionation		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

CTNNBL1

56259

Affinity Capture-MS

Homo sapiens

NUPL2

11097

Affinity Capture-MS

Homo sapiens

ATG16L1

55054

Affinity Capture-MS

Homo sapiens

POLR2C

5432

Affinity Capture-MS

Homo sapiens

SFN

2810

Co-fractionation

Homo sapiens

CHTOP

Affinity Capture-MS

Homo sapiens

PFN2

5217

Affinity Capture-MS

Homo sapiens

METTL18

Affinity Capture-MS

Homo sapiens

SLC4A1AP

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

MYCN

Affinity Capture-MS

Homo sapiens

RBM42

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

THOC1

9984

Affinity Capture-MS

Homo sapiens

FKBP10

60681

Affinity Capture-MS

Homo sapiens

ARHGAP9

64333

Affinity Capture-MS

Homo sapiens

100

ARHGEF4

Affinity Capture-MS

Homo sapiens

101

LSM1

27257

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

102

RBM8A

9939

Co-fractionation		Homo sapiens
Affinity Capture-MS		Homo sapiens

103

KIF14

9928

Affinity Capture-MS

Homo sapiens

104

SRPK1

6732

Affinity Capture-MS

Homo sapiens

105

FOXP1

27086

Protein-RNA

Homo sapiens

106

LIN28A

Affinity Capture-MS

Homo sapiens

107

LSM2

57819

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

108

POLR2K

Affinity Capture-MS

Homo sapiens

109

DHX35

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

110

WDR82

80335

Affinity Capture-MS

Homo sapiens

111

CHMP4C

92421

Affinity Capture-MS

Homo sapiens

112

GEMIN5

25929

Reconstituted Complex		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

113

SRP9

6726

Affinity Capture-MS

Homo sapiens

114

RAD23B

5887

Co-fractionation

Homo sapiens

115

IGHA1

3493

Affinity Capture-MS

Homo sapiens

116

P4HA1

5033

Affinity Capture-MS

Homo sapiens

117

CCDC12

Affinity Capture-MS

Homo sapiens

118

HNRNPA0

10949

Affinity Capture-MS

Homo sapiens

119

ARHGEF39

84904

Affinity Capture-MS

Homo sapiens

120

DDX21

9188

Affinity Capture-MS

Homo sapiens

121

LIN28B

Affinity Capture-MS

Homo sapiens

122

RPL9

6133

Two-hybrid

Homo sapiens

123

ZNF207

7756

Affinity Capture-MS

Homo sapiens

124

MEPCE

56257

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

125

ZMAT5

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

126

PPIL1

51645

Affinity Capture-MS

Homo sapiens

127

DDX39B

7919

Affinity Capture-MS

Homo sapiens

128

SUPT5H

6829

Affinity Capture-MS

Homo sapiens

129

SNRNP40

9410

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

130

CLNS1A

1207

Affinity Capture-MS		Homo sapiens
Reconstituted Complex		Homo sapiens
Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens
Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

131

SNRNP25

Affinity Capture-MS

Homo sapiens

132

PNN

5411

Affinity Capture-MS

Homo sapiens

133

MAPRE1

22919

Co-fractionation

Homo sapiens

134

ACIN1

22985

Affinity Capture-MS

Homo sapiens

135

CRNKL1

51340

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

136

SRRT

51593

Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens

137

PPIH

10465

Affinity Capture-MS

Homo sapiens

138

SNRNP200

23020

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

139

CST1

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

140

RPL5

6125

Affinity Capture-MS

Homo sapiens

141

DDX20

11218

Affinity Capture-Western		Homo sapiens
Reconstituted Complex		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

142

UBFD1

56061

Co-fractionation

Homo sapiens

143

3550

Affinity Capture-MS

Homo sapiens

144

SNRPD1

6632

Co-fractionation		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

145

VCL

7414

Co-fractionation

Homo sapiens

146

PPP1R8

5511

Affinity Capture-MS

Homo sapiens

147

DDX5

1655

Affinity Capture-MS

Homo sapiens

148

PLRG1

5356

Affinity Capture-MS

Homo sapiens

149

OSBPL2

9885

Two-hybrid

Homo sapiens

150

PIGR

5284

Affinity Capture-MS

Homo sapiens

151

CHERP

10523

Affinity Capture-MS

Homo sapiens

152

PRPF8

10594

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

153

SNRPB2

6629

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

154

PARP1

142

Proximity Label-MS

Homo sapiens

155

MEOX2

Two-hybrid

Homo sapiens

156

SNRPN

6638

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

157

SF3B6

51639

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

158

UQCRC1

7384

Affinity Capture-MS

Homo sapiens

159

LAGE3

Co-fractionation

Homo sapiens

160

ITGA4

3676

Affinity Capture-MS

Homo sapiens

161

DHX9

1660

Affinity Capture-MS

Homo sapiens

162

ZRSR2

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

163

GEMIN7

Affinity Capture-MS

Homo sapiens

164

CTR9

9646

Affinity Capture-MS

Homo sapiens

165

CUL2

8453

Affinity Capture-MS

Homo sapiens

166

EED

Affinity Capture-MS

Homo sapiens

167

LSM8

51691

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

168

SNRPGP15

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

169

TXNL4A

10907

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

170

HNRNPA3

220988

Affinity Capture-MS

Homo sapiens

171

PRPF31

26121

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

172

CEBPA

Protein-peptide

Homo sapiens

173

CYLD

Affinity Capture-MS

Homo sapiens

174

SF3A3

10946

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

175

GPATCH11

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

176

TRA2B

6434

Affinity Capture-MS

Homo sapiens

177

RPRD1B

58490

Affinity Capture-MS

Homo sapiens

178

IGBP1

3476

Co-fractionation

Homo sapiens

179

P3H1

64175

Affinity Capture-MS

Homo sapiens

180

ZNF326

284695

Affinity Capture-MS

Homo sapiens

181

POLR2J

Affinity Capture-MS

Homo sapiens

182

HNRNPDL

9987

Affinity Capture-MS

Homo sapiens

183

SF3B2

10992

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

184

OLA1

29789

Co-fractionation

Homo sapiens

185

RBM39

9584

Affinity Capture-MS

Homo sapiens

186

S100P

6286

Co-fractionation

Homo sapiens

187

TAF15

8148

Affinity Capture-MS

Homo sapiens

188

PRPF4B

8899

Affinity Capture-MS

Homo sapiens

189

SUGP1

Affinity Capture-MS

Homo sapiens

190

LEO1

123169

Affinity Capture-MS

Homo sapiens

191

DOCK8

81704

Affinity Capture-MS

Homo sapiens

192

ECD

Affinity Capture-MS

Homo sapiens

193

XAB2

56949

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

194

SNRNP35

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

195

NCBP2

22916

Affinity Capture-MS

Homo sapiens

196

OCRL

4952

Affinity Capture-MS

Homo sapiens

197

CD2BP2

10421

Affinity Capture-MS		Homo sapiens
Co-fractionation		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

198

HTATSF1

27336

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

199

FERMT2

10979

Co-fractionation

Homo sapiens

200

SRSF1

6426

Affinity Capture-MS

Homo sapiens

201

YLPM1

56252

Affinity Capture-MS

Homo sapiens

202

PCNP

57092

Affinity Capture-MS

Homo sapiens

203

RPRD2

Affinity Capture-MS

Homo sapiens

204

CUL3

8452

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

205

YWHAZ

7534

Co-fractionation

Homo sapiens

206

TXN

7295

Affinity Capture-MS

Homo sapiens

207

SRSF5

6430

Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens

208

EGFR

1956

Affinity Capture-MS		Homo sapiens
Negative Genetic		Homo sapiens

209

GEMIN2

8487

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

210

SYNCRIP

10492

Affinity Capture-MS

Homo sapiens

211

PRPF19

27339

Affinity Capture-MS

Homo sapiens

212

HNRNPA1

3178

Affinity Capture-MS

Homo sapiens

213

FUS

2521

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

214

TSSC4

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

215

IKZF1

Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens

216

POLR2A

5430

Affinity Capture-MS

Homo sapiens

217

RNU4ATAC

Affinity Capture-Western

Homo sapiens

218

SART1

9092

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

219

FN1

2335

Affinity Capture-MS

Homo sapiens

220

P4HB

5034

Affinity Capture-MS

Homo sapiens

221

STRAP

11171

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

222

YTHDC1

Affinity Capture-MS

Homo sapiens

223

EFTUD2

9343

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

224

RANBP9

10048

Affinity Capture-MS

Homo sapiens

225

CDK2

1017

Affinity Capture-MS

Homo sapiens

226

GEMIN4

50628

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

227

SCAF4

57466

Affinity Capture-MS

Homo sapiens

228

CST4

1472

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

229

IL7R

Protein-RNA

Homo sapiens

230

MFAP1

Affinity Capture-MS

Homo sapiens

231

MYO6

4646

Affinity Capture-MS

Homo sapiens

232

IFIT1

3434

Affinity Capture-MS

Homo sapiens

233

SERBP1

26135

Affinity Capture-MS

Homo sapiens

234

SEC31A

22872

Cross-Linking-MS (XL-MS)

Homo sapiens

235

PPWD1

23398

Affinity Capture-MS

Homo sapiens

236

ZC3H18

Affinity Capture-MS

Homo sapiens

237

GID8

54994

Affinity Capture-MS

Homo sapiens

238

CRTAP

10491

Affinity Capture-MS

Homo sapiens

239

TERF2

Affinity Capture-MS

Homo sapiens

240

NCBP1

4686

Affinity Capture-MS

Homo sapiens

241

TOP1

7150

Affinity Capture-MS

Homo sapiens

242

NHP2L1

4809

Affinity Capture-MS

Homo sapiens

243

SCAF11

Affinity Capture-MS

Homo sapiens

244

BCAS2

10286

Affinity Capture-MS

Homo sapiens

245

SART3

9733

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

246

DDRGK1

65992

Affinity Capture-MS

Homo sapiens

247

SF3B3

23450

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

248

TBCA

6902

Co-fractionation

Homo sapiens

249

ERICH1

Affinity Capture-MS

Homo sapiens

250

ARHGAP31

57514

Affinity Capture-MS

Homo sapiens

251

ZC3H11A

Affinity Capture-MS

Homo sapiens

252

GPBP1L1

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

253

RBM17

84991

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

254

SNRPB

6628

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

255

TRA2A

29896

Affinity Capture-MS

Homo sapiens

256

THOC7

80145

Affinity Capture-MS

Homo sapiens

257

U2SURP

23350

Affinity Capture-MS

Homo sapiens

258

ARHGEF7

8874

Affinity Capture-MS

Homo sapiens

259

PAFAH1B1

5048

Co-fractionation

Homo sapiens

260

PAXBP1

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

261

DHX15

1665

Affinity Capture-MS

Homo sapiens

262

POLR2B

5431

Affinity Capture-MS

Homo sapiens

263

SUPT4H1

Affinity Capture-MS

Homo sapiens

264

PLEKHA4

57664

Affinity Capture-MS

Homo sapiens

265

EAPP

Affinity Capture-MS

Homo sapiens

266

EIF4A3

9775

Affinity Capture-MS

Homo sapiens

267

TOE1

114034

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

268

SMN1

6606

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

269

HDGF

3068

Co-fractionation

Homo sapiens

270

WDR77

79084

Affinity Capture-MS

Homo sapiens

271

TTC33

Affinity Capture-MS

Homo sapiens

272

SRRM1

10250

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

273

RNU6ATAC

Affinity Capture-Western

Homo sapiens

274

HNRNPR

10236

Affinity Capture-MS

Homo sapiens

275

SH3BGRL

6451

Co-fractionation

Homo sapiens

276

TERF2IP

54386

Affinity Capture-MS

Homo sapiens

277

SNUPN

10073

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

278

CDC40

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

279

SF3A1

10291

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

280

SSRP1

6749

Affinity Capture-MS

Homo sapiens

281

GEMIN6

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

282

SF3B4

10262

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

283

PRMT5

10419

Affinity Capture-MS

Homo sapiens

284

SAP18

10284

Affinity Capture-MS

Homo sapiens

285

ZCRB1

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

286

SNRPA

6626

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

287

NKTR

Affinity Capture-MS

Homo sapiens

288

SMNDC1

Affinity Capture-MS

Homo sapiens

289

THRAP3

9967

Affinity Capture-MS

Homo sapiens

290

HSPB1

3315

Two-hybrid

Homo sapiens

291

ELAVL1

1994

Affinity Capture-RNA		Homo sapiens
Affinity Capture-MS		Homo sapiens

292

KLHL8

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

293

Sf3a1

67465

Affinity Capture-MS

Mus musculus

294

SMN2

6607

Reconstituted Complex		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

295

PHF3

Affinity Capture-MS

Homo sapiens

296

PUF60

22827

Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens

297

LSM5

Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens
Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens
Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens
Two-hybrid		Homo sapiens

298

BPIFA2

140683

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

299

TUT1

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

300

LARP7

51574

Affinity Capture-MS

Homo sapiens

301

RNPC3

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

302

TAGLN2

8407

Co-fractionation

Homo sapiens

303

OGG1

Affinity Capture-MS

Homo sapiens

304

PAF1

54623

Affinity Capture-MS

Homo sapiens

305

LSM7

Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens

306

DDX3X

1654

Affinity Capture-MS

Homo sapiens

307

EZH2

Affinity Capture-MS

Homo sapiens

308

ALYREF

10189

Affinity Capture-MS

Homo sapiens

309

SRSF9

8683

Affinity Capture-MS

Homo sapiens

310

PDCD7

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

311

ZG16B

124220

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

312

MYO1E

4643

Co-fractionation

Homo sapiens

313

PRPF6

24148

Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

314

DIDO1

Affinity Capture-MS

Homo sapiens

315

DDX42

11325

Affinity Capture-MS

Homo sapiens

316

LDLR

3949

Negative Genetic

Homo sapiens

317

LSM6

11157

Two-hybrid		Homo sapiens
Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

318

PRPF4

9128

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

319

SNW1

22938

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

320

KRAS

3845

Synthetic Growth Defect		Homo sapiens
Affinity Capture-MS		Homo sapiens
Synthetic Lethality		Homo sapiens
Negative Genetic		Homo sapiens

321

HNRNPU

3192

Affinity Capture-MS

Homo sapiens

322

MYC

Affinity Capture-MS

Homo sapiens

323

SNRPA1

6627

Two-hybrid		Homo sapiens
Co-fractionation		Homo sapiens
Affinity Capture-MS		Homo sapiens
Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

324

WBP4

Affinity Capture-MS		Homo sapiens
Affinity Capture-MS		Homo sapiens

325

CPSF6

11052

Affinity Capture-MS

Homo sapiens

326

LNX1

Two-hybrid

Homo sapiens

327

HNRNPUL1

11100

Affinity Capture-MS

Homo sapiens

328

IFIT2

3433

Affinity Capture-MS

Homo sapiens

329

LSM3

27258

Two-hybrid		Homo sapiens
Affinity Capture-MS		Homo sapiens

330

MECP2

4204

Affinity Capture-MS

Homo sapiens

331

CDC5L

988

Affinity Capture-MS

Homo sapiens

332

PPIG

9360

Affinity Capture-MS

Homo sapiens

View the network

Pathways in which SNRPF is involved

Pathway	Evidence	Source
Disease	TAS	Reactome
Gene expression (Transcription)	TAS	Reactome
Infectious disease	TAS	Reactome
Metabolism of non-coding RNA	TAS	Reactome
Metabolism of RNA	TAS	Reactome
mRNA Splicing	TAS	Reactome
mRNA Splicing - Major Pathway	TAS	Reactome
mRNA Splicing - Minor Pathway	TAS	Reactome
Processing of Capped Intron-Containing Pre-mRNA	TAS	Reactome
Processing of Capped Intronless Pre-mRNA	TAS	Reactome
RNA Polymerase II Transcription	TAS	Reactome
RNA Polymerase II Transcription Termination	TAS	Reactome
SARS-CoV Infections	TAS	Reactome
SARS-CoV-2 Infection	TAS	Reactome
SARS-CoV-2 modulates host translation machinery	TAS	Reactome
SARS-CoV-2-host interactions	TAS	Reactome
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs	TAS	Reactome
SLBP independent Processing of Histone Pre-mRNAs	TAS	Reactome
snRNP Assembly	TAS	Reactome
Viral Infection Pathways	TAS	Reactome

Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here