Gene description for RN7SK |
Gene name |
RNA, 7SK small nuclear |
Gene symbol |
RN7SK |
Other names/aliases |
7SK |
Species |
Homo sapiens |
Database cross references - RN7SK |
ExoCarta |
ExoCarta_125050 |
Vesiclepedia |
VP_125050 |
Entrez Gene |
125050 |
HGNC |
10037 |
MIM |
606515 |
RN7SK identified in exosomes derived from the following tissue/cell type |
Endothelial cells
|
26027894
|
Plasma
|
23663360
|
Gene ontology annotations for RN7SK |
|
Experiment description of studies that identified RN7SK in exosomes |
1 |
Experiment ID |
226 |
MISEV standards |
✔
EM
|
EV Biophysical techniques |
✔
GAPDH|CD9|FLOT1
|
EV Enriched markers |
✔
LMNA|H2AFX|ATP5A1|TOMM20
|
EV Negative markers |
✘
|
EV Particle analysis
|
|
Identified molecule |
ncRNA
|
Identification method |
Small RNA sequencing (Illumina HiSeq 2000 (Solexa)
|
PubMed ID |
26027894
|
Organism |
Homo sapiens |
Experiment description |
Quantitative and qualitative analysis of small RNAs in human endothelial cells and exosomes provides insights into localized RNA processing, degradation and sorting |
Authors |
Bas W. M. van Balkom, Almut S. Eisele, D. Michiel Pegtel, Sander Bervoets, Marianne C. Verhaar |
Journal name |
Journal of Extracellular Vesicles
|
Publication year |
2015 |
Sample |
Endothelial cells |
Sample name |
HMEC-1 |
Isolation/purification methods |
Differential ultracentrifugation Sucrose density gradient |
Flotation density |
1.10 g/mL
|
Molecules identified in the study |
miRNA Protein snoRNA lncRNA yRNA snRNA mRNA ncRNA mtRNA vtRNA scaRNA lincRNA |
Methods used in the study |
Small RNA sequencing (Illumina HiSeq 2000 (Solexa) Western blotting |
|
|
2 |
Experiment ID |
222 |
MISEV standards |
✘
|
EV Biophysical techniques |
✘
|
EV Enriched markers |
✘
|
EV Negative markers |
✔
NTA
|
EV Particle analysis
|
|
Identified molecule |
snRNA
|
Identification method |
RT-PCR
|
PubMed ID |
23663360
|
Organism |
Homo sapiens |
Experiment description |
Characterization of human plasma-derived exosomal RNAs by deep sequencing |
Authors |
Huang X, Yuan T, Tschannen M, Sun Z, Jacob H, Du M, Liang M, Dittmar RL, Liu Y, Liang M, Kohli M, Thibodeau SN, Boardman L, Wang L |
Journal name |
BMC Genomics
|
Publication year |
2013 |
Sample |
Plasma |
Sample name |
Plasma - Normal |
Isolation/purification methods |
Exoquick |
Flotation density |
-
|
Molecules identified in the study |
miRNA tRNA snRNA snoRNA rRNA piRNA lncRNA |
Methods used in the study |
RT-PCR |
|
|
Protein-protein interactions for RN7SK |
|
Pathways in which RN7SK is involved |
No pathways found
|
|
|