Gene description for Lyn
Gene name Yamaguchi sarcoma viral (v-yes-1) oncogene homolog
Gene symbol Lyn
Other names/aliases AA407514
Hck-2
p53Lyn
p56Lyn
Species Mus musculus
 Database cross references - Lyn
ExoCarta ExoCarta_17096
Entrez Gene 17096
UniProt P25911  
 Lyn identified in exosomes derived from the following tissue/cell type
Macrophages 23658846    
Macrophages 23658846    
Macrophages 23658846    
Mast cells 17486113    
 Gene ontology annotations for Lyn
Molecular Function
    receptor binding GO:0005102 ISO
    protein complex binding GO:0032403 ISO
    glycosphingolipid binding GO:0043208 ISO
    ion channel binding GO:0044325 ISO
    protein binding GO:0005515 IPI
    gamma-tubulin binding GO:0043015 ISO
    enzyme binding GO:0019899 ISO
    erythropoietin receptor binding GO:0005128 TAS
    transferase activity GO:0016740 IEA
    kinase activity GO:0016301 IEA
    nucleotide binding GO:0000166 IEA
    platelet-derived growth factor receptor binding GO:0005161 ISO
    SH3 domain binding GO:0017124 IPI
    ubiquitin protein ligase binding GO:0031625 ISO
    phosphoprotein binding GO:0051219 ISO
    protein kinase activity GO:0004672 IDA
    protein tyrosine kinase activity GO:0004713 ISO
    ATP binding GO:0005524 IEA
    integrin binding GO:0005178 ISO
    non-membrane spanning protein tyrosine kinase activity GO:0004715 IBA
    transferase activity, transferring phosphorus-containing groups GO:0016772 IEA
Biological Process
    negative regulation of MAP kinase activity GO:0043407 IMP
    immune response-regulating cell surface receptor signaling pathway GO:0002768 IMP
    phosphorylation GO:0016310 IEA
    regulation of B cell receptor signaling pathway GO:0050855 IMP
    protein autophosphorylation GO:0046777 TAS
    negative regulation of ERK1 and ERK2 cascade GO:0070373 IMP
    innate immune response GO:0045087 IBA
    negative regulation of intracellular signal transduction GO:1902532 IMP
    erythrocyte differentiation GO:0030218 IMP
    positive regulation of cell migration GO:0030335 IMP
    negative regulation of B cell proliferation GO:0030889 IMP
    peptidyl-tyrosine autophosphorylation GO:0038083 IBA
    positive regulation of cell proliferation GO:0008284 IMP
    regulation of ERK1 and ERK2 cascade GO:0070372 IMP
    regulation of release of sequestered calcium ion into cytosol GO:0051279 ISO
    negative regulation of cell proliferation GO:0008285 ISO
    positive regulation of B cell receptor signaling pathway GO:0050861 IGI
    regulation of cytokine secretion GO:0050707 IMP
    regulation of B cell apoptotic process GO:0002902 IMP
    transmembrane receptor protein tyrosine kinase signaling pathway GO:0007169 ISO
    negative regulation of mast cell proliferation GO:0070667 IMP
    regulation of platelet aggregation GO:0090330 IMP
    lipopolysaccharide-mediated signaling pathway GO:0031663 IMP
    positive regulation of tyrosine phosphorylation of STAT protein GO:0042531 IMP
    response to hormone GO:0009725 IDA
    positive regulation of dendritic cell apoptotic process GO:2000670 IMP
    cellular response to DNA damage stimulus GO:0006974 ISO
    regulation of inflammatory response GO:0050727 IMP
    positive regulation of phosphorylation GO:0042327 ISO
    Fc receptor mediated stimulatory signaling pathway GO:0002431 IMP
    regulation of mast cell degranulation GO:0043304 IMP
    regulation of cytokine production GO:0001817 IMP
    cytokine secretion GO:0050663 ISO
    positive regulation of cellular component movement GO:0051272 ISO
    regulation of mast cell activation GO:0033003 IMP
    positive regulation of phosphatidylinositol 3-kinase activity GO:0043552 IMP
    B cell receptor signaling pathway GO:0050853 IDA
    hemoglobin biosynthetic process GO:0042541 TAS
    positive regulation of neuron projection development GO:0010976 ISO
    negative regulation of toll-like receptor 2 signaling pathway GO:0034136 IMP
    negative regulation of myeloid leukocyte differentiation GO:0002762 IMP
    positive regulation of oligodendrocyte progenitor proliferation GO:0070447 ISO
    positive regulation of stress-activated protein kinase signaling cascade GO:0070304 ISO
    tolerance induction to self antigen GO:0002513 IMP
    regulation of erythrocyte differentiation GO:0045646 IMP
    negative regulation of protein phosphorylation GO:0001933 IMP
    intracellular signal transduction GO:0035556 IDA
    positive regulation of peptidyl-tyrosine phosphorylation GO:0050731 IDA
    negative regulation of toll-like receptor 4 signaling pathway GO:0034144 IMP
    positive regulation of mast cell proliferation GO:0070668 ISO
    platelet degranulation GO:0002576 IMP
    neuron projection development GO:0031175 IMP
    dendritic cell differentiation GO:0097028 IMP
    peptidyl-tyrosine phosphorylation GO:0018108 ISO
    cellular response to peptide hormone stimulus GO:0071375 IBA
    hemopoiesis GO:0030097 IMP
    protein phosphorylation GO:0006468 ISO
    regulation of cell adhesion mediated by integrin GO:0033628 ISO
    signal transduction GO:0007165 TAS
    positive regulation of Fc receptor mediated stimulatory signaling pathway GO:0060369 ISO
    histamine secretion by mast cell GO:0002553 ISO
    Fc receptor mediated inhibitory signaling pathway GO:0002774 IMP
    immune system process GO:0002376 IEA
    cellular response to retinoic acid GO:0071300 ISO
    inflammatory response GO:0006954 IEA
    positive regulation of glial cell proliferation GO:0060252 ISO
    regulation of monocyte chemotaxis GO:0090025 ISO
    B cell homeostasis GO:0001782 IMP
Subcellular Localization
    integrin alpha2-beta1 complex GO:0034666 ISO
    cell-cell adherens junction GO:0005913 ISO
    nucleus GO:0005634 ISO
    mitochondrial intermembrane space GO:0005758 ISO
    postsynaptic density GO:0014069 ISO
    membrane raft GO:0045121 ISO
    mitochondrial membrane GO:0031966 ISO
    perinuclear region of cytoplasm GO:0048471 ISO
    extracellular exosome GO:0070062 ISO
    mast cell granule GO:0042629 ISO
    mitochondrial crista GO:0030061 ISO
    cell GO:0005623 IMP
    Golgi apparatus GO:0005794 ISO
    cytoplasm GO:0005737 IDA
    membrane GO:0016020 ISO
    plasma membrane GO:0005886 ISO
    extrinsic component of cytoplasmic side of plasma membrane GO:0031234 IBA
 Experiment description of studies that identified Lyn in exosomes
1
Experiment ID 214
ISEV standards
EM
EV Biophysical techniques
EV Cytosolic markers
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23658846    
Organism Mus musculus
Experiment description Immunomodulatory impact of leishmania-induced macrophage exosomes: a comparative proteomic and functional analysis.
Authors Hassani K, Olivier M.
Journal name PLoS Negl Trop Dis
Publication year 2013
Sample Macrophages
Sample name Leishmania-infected-Macrophage (J774A.1)
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Filtration
Protease inhibitors
Sucrose density gradient
Filtration
Ultracentrifugation
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
2
Experiment ID 215
ISEV standards
EM
EV Biophysical techniques
EV Cytosolic markers
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23658846    
Organism Mus musculus
Experiment description Immunomodulatory impact of leishmania-induced macrophage exosomes: a comparative proteomic and functional analysis.
Authors Hassani K, Olivier M.
Journal name PLoS Negl Trop Dis
Publication year 2013
Sample Macrophages
Sample name LPS-treated-Macrophage (J774A.1)
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Filtration
Protease inhibitors
Sucrose density gradient
Filtration
Ultracentrifugation
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
3
Experiment ID 216
ISEV standards
EM
EV Biophysical techniques
EV Cytosolic markers
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23658846    
Organism Mus musculus
Experiment description Immunomodulatory impact of leishmania-induced macrophage exosomes: a comparative proteomic and functional analysis.
Authors Hassani K, Olivier M.
Journal name PLoS Negl Trop Dis
Publication year 2013
Sample Macrophages
Sample name Normal-Macrophage (J774A.1)
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Filtration
Protease inhibitors
Sucrose density gradient
Filtration
Ultracentrifugation
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
4
Experiment ID 15
ISEV standards
EM
EV Biophysical techniques
EV Cytosolic markers
CD63
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 17486113    
Organism Mus musculus
Homo sapiens
Experiment description Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.
Authors Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO
Journal name NCB
Publication year 2007
Sample Mast cells
Sample name MC9
Bone marrow-derived mast cells
HMC-1
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.11-1.21 g/mL
Molecules identified in the study Protein
mRNA
miRNA
Methods used in the study Mass spectrometry [MALDI TOF]
Western blotting
Microarray
miRCURY LNA Array
 Protein-protein interactions for Lyn
  Protein Interactor ExoCarta ID Identification method PubMed Species
No interactions are found.



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