Gene description for Itgb1
Gene name integrin, beta 1
Gene symbol Itgb1
Other names/aliases -
Species Rattus norvegicus
 Database cross references - Itgb1
ExoCarta ExoCarta_24511
Entrez Gene 24511
UniProt P49134  
 Itgb1 identified in exosomes derived from the following tissue/cell type
Adipocytes 25998041    
Hepatocytes 19367702    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
 Gene ontology annotations for Itgb1
Molecular Function
    protein heterodimerization activity GO:0046982 ISO
    peptide binding GO:0042277 IDA
    alpha-actinin binding GO:0051393 IDA
    cell adhesion molecule binding GO:0050839 ISO
    protein complex binding GO:0032403 IPI
    fibronectin binding GO:0001968 IDA
    receptor binding GO:0005102 IPI
    glycoprotein binding GO:0001948 IPI
    laminin binding GO:0043236 ISO
    collagen binding GO:0005518 IDA
    protease binding GO:0002020 ISO
    protein kinase binding GO:0019901 IPI
    protein binding GO:0005515 IPI
    protein domain specific binding GO:0019904 IDA
    kinase binding GO:0019900 IPI
    metal ion binding GO:0046872 IEA
    actin binding GO:0003779 ISO
    receptor activity GO:0004872 IEA
    integrin binding GO:0005178 ISO
    collagen binding involved in cell-matrix adhesion GO:0098639 ISO
Biological Process
    negative regulation of neuron differentiation GO:0045665 IMP
    protein transport within lipid bilayer GO:0032594 IMP
    cell-cell adhesion mediated by integrin GO:0033631 ISO
    in utero embryonic development GO:0001701 ISO
    positive regulation of neuron differentiation GO:0045666 IMP
    positive regulation of cell proliferation GO:0008284 ISO
    negative regulation of cell projection organization GO:0031345 IMP
    regulation of cell cycle GO:0051726 ISO
    cell-matrix adhesion GO:0007160 ISO
    transforming growth factor beta receptor signaling pathway GO:0007179 ISO
    regulation of G-protein coupled receptor protein signaling pathway GO:0008277 IMP
    response to gonadotropin GO:0034698 IEP
    dendrite morphogenesis GO:0048813 ISO
    maternal process involved in female pregnancy GO:0060135 IEP
    mesodermal cell differentiation GO:0048333 ISO
    positive regulation of cell migration GO:0030335 IMP
    G1/S transition of mitotic cell cycle GO:0000082 ISO
    calcium-independent cell-matrix adhesion GO:0007161 ISO
    visual learning GO:0008542 ISO
    positive regulation of establishment of protein localization to plasma membrane GO:0090004 ISS
    cell migration GO:0016477 ISO
    negative regulation of cell differentiation GO:0045596 ISO
    cardiac muscle tissue development GO:0048738 ISO
    negative regulation of Rho protein signal transduction GO:0035024 ISO
    positive regulation of apoptotic process GO:0043065 ISO
    sarcomere organization GO:0045214 ISO
    tissue homeostasis GO:0001894 IMP
    positive regulation of cell-substrate adhesion GO:0010811 IMP
    negative regulation of cell proliferation GO:0008285 IMP
    stress fiber assembly GO:0043149 ISO
    leukocyte cell-cell adhesion GO:0007159 ISO
    cell migration involved in sprouting angiogenesis GO:0002042 ISO
    regulation of collagen catabolic process GO:0010710 ISS
    leukocyte tethering or rolling GO:0050901 ISO
    cellular response to vitamin D GO:0071305 IEP
    integrin-mediated signaling pathway GO:0007229 ISO
    positive regulation of endocytosis GO:0045807 IMP
    germ cell migration GO:0008354 ISO
    axon extension GO:0048675 ISO
    cellular response to ionizing radiation GO:0071479 IEP
    neuron projection development GO:0031175 ISO
    response to drug GO:0042493 IEP
    bicellular tight junction assembly GO:0070830 IMP
    response to nutrient levels GO:0031667 IEP
    heterotypic cell-cell adhesion GO:0034113 ISO
    response to activity GO:0014823 IEP
    cardiac muscle cell differentiation GO:0055007 ISO
    cellular calcium ion homeostasis GO:0006874 IDA
    response to transforming growth factor beta GO:0071559 IEP
    cell fate specification GO:0001708 ISO
    cellular response to mechanical stimulus GO:0071260 IEP
    positive regulation of MAPK cascade GO:0043410 IDA
    cell-substrate adhesion GO:0031589 ISO
    negative regulation of anoikis GO:2000811 ISO
    cell adhesion GO:0007155 IDA
    positive regulation of peptidyl-tyrosine phosphorylation GO:0050731 IMP
    formation of radial glial scaffolds GO:0021943 ISO
    positive regulation of neuron projection development GO:0010976 IMP
Subcellular Localization
    recycling endosome GO:0055037 IEA
    synaptic membrane GO:0097060 ISO
    integrin alpha1-beta1 complex GO:0034665 ISO
    sarcolemma GO:0042383 ISO
    cytoplasmic vesicle GO:0031410 ISO
    cytoplasm GO:0005737 ISO
    hemidesmosome GO:0030056 IDA
    filopodium GO:0030175 ISO
    basement membrane GO:0005604 IDA
    invadopodium membrane GO:0071438 ISS
    integrin complex GO:0008305 IDA
    integrin alpha3-beta1 complex GO:0034667 ISO
    cell surface GO:0009986 ISO
    dendritic spine GO:0043197 ISO
    intercalated disc GO:0014704 ISO
    neuromuscular junction GO:0031594 ISO
    extracellular exosome GO:0070062 ISO
    acrosomal vesicle GO:0001669 IDA
    myelin sheath abaxonal region GO:0035748 ISO
    receptor complex GO:0043235 ISO
    adherens junction GO:0005912 IDA
    external side of plasma membrane GO:0009897 ISO
    synapse GO:0045202 ISO
    melanosome GO:0042470 IEA
    integrin alpha2-beta1 complex GO:0034666 ISO
    perinuclear region of cytoplasm GO:0048471 ISO
    focal adhesion GO:0005925 ISO
    integrin alpha7-beta1 complex GO:0034677 ISO
    integrin alpha9-beta1 complex GO:0034679 IDA
    integrin alpha10-beta1 complex GO:0034680 ISO
    plasma membrane GO:0005886 TAS
    membrane GO:0016020 ISO
    membrane raft GO:0045121 ISO
    integrin alpha11-beta1 complex GO:0034681 ISO
    lamellipodium GO:0030027 IEA
    cell-cell junction GO:0005911 IDA
    ruffle membrane GO:0032587 ISO
 Experiment description of studies that identified Itgb1 in exosomes
1
Experiment ID 225
ISEV standards
EM
EV Biophysical techniques
GAPDH
EV Cytosolic markers
CD63
EV Membrane markers
EV Negative markers
NTA
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25998041    
Organism Rattus norvegicus
Experiment description Proteomic Analysis of Extracellular Vesicles Released by Adipocytes of Otsuka Long-Evans Tokushima Fatty (OLETF) Rats.
Authors Lee JE, Moon PG, Lee IK, Baek MC
Journal name Protein J
Publication year 2015
Sample Adipocytes
Sample name Adipocytes
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
2
Experiment ID 35
ISEV standards
CEM
EV Biophysical techniques
TSG101|Alix
EV Cytosolic markers
CD81|CD63
EV Membrane markers
HSPA5
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Western blotting
PubMed ID 19367702    
Organism Rattus norvegicus
Experiment description Characterization and Comprehensive Proteome Profiling of Exosomes Secreted by Hepatocytes.
Authors Conde-Vancells J, Rodriguez-Suarez E, Embade N, Gil D, Matthiesen R, Valle M, Elortza F, Lu SC, Mato JM, Falcon-Perez JM
Journal name JPR
Publication year 2008
Sample Hepatocytes
Sample name Hepatocytes
Isolation/purification methods Differential centrifugation
Filtration
Sucrose density gradient
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [QTOF]
Western blotting
3
Experiment ID 90
ISEV standards
EM
EV Biophysical techniques
HSC70|HSP90|TSG101
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
4
Experiment ID 94
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
5
Experiment ID 96
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
6
Experiment ID 97
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
7
Experiment ID 98
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D7 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.25 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
8
Experiment ID 99
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [QSTAR]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
9
Experiment ID 100
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [QSTAR]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
 Protein-protein interactions for Itgb1
  Protein Interactor ExoCarta ID Identification method PubMed Species
No interactions are found.



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