Gene description for Hnrnpdl
Gene name heterogeneous nuclear ribonucleoprotein D-like
Gene symbol Hnrnpdl
Other names/aliases AA407431
AA959857
D5Ertd650e
D5Wsu145e
Hnrnpdl1
Hnrpdl
JKTBP
hnRNP DL
hnRNP-DL
Species Mus musculus
 Database cross references - Hnrnpdl
ExoCarta ExoCarta_50926
Vesiclepedia VP_50926
Entrez Gene 50926
 Hnrnpdl identified in sEVs derived from the following tissue/cell type
Colon cancer cells 37309723    
T-cell lymphoma cells 37309723    
 Gene ontology annotations for Hnrnpdl
Molecular Function
    DNA binding GO:0003677 ISO
    double-stranded DNA binding GO:0003690 ISO
    single-stranded DNA binding GO:0003697 ISO
    RNA binding GO:0003723 IBA
    RNA binding GO:0003723 ISO
    poly(A) binding GO:0008143 ISO
    poly(G) binding GO:0034046 ISO
Biological Process
    regulation of gene expression GO:0010468 IBA
    regulation of gene expression GO:0010468 ISO
    mRNA metabolic process GO:0016071 ISO
Subcellular Localization
    chromatin GO:0000785 IBA
    nucleus GO:0005634 IDA
    nucleus GO:0005634 ISO
    nucleoplasm GO:0005654 IBA
    nucleoplasm GO:0005654 ISO
    cytoplasm GO:0005737 IEA
    synapse GO:0045202 EXP
    synapse GO:0045202 IDA
 Experiment description of studies that identified Hnrnpdl in sEVs
1
Experiment ID 907
MISEV standards
EM
Biophysical techniques
Tsg101|Sdcbp|Cd151|Gapdh|Lamp2|Cd81|Cd82|Cd9|Cd63|Cd80|Flot2|Tfrc|Rab35|Rab5a
Enriched markers
HSPA5
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 37309723    
Organism Mus musculus
Experiment description Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells
Authors "Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S."
Journal name Proteomics
Publication year 2023
Sample Colon cancer cells
Sample name C26
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
2
Experiment ID 908
MISEV standards
EM
Biophysical techniques
Tsg101|Sdcbp|Cd151|Gapdh|Lamp2|Cd81|Cd82|Cd9|Cd63|Cd80|Flot2|Tfrc|Rab35|Rab5a
Enriched markers
HSPA5
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 37309723    
Organism Mus musculus
Experiment description Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells
Authors "Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S."
Journal name Proteomics
Publication year 2023
Sample T-cell lymphoma cells
Sample name EL4
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
 Protein-protein interactions for Hnrnpdl
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Ddx5 13207
Co-fractionation Mus musculus
2 Dhx15 13204
Co-fractionation Mus musculus
3 Ddx17 67040
Co-fractionation Mus musculus
4 Ddx3x 13205
Co-fractionation Mus musculus
5 Unk  
Affinity Capture-RNA Mus musculus
6 Fancd2  
Affinity Capture-MS Mus musculus
View the network image/svg+xml
 Pathways in which Hnrnpdl is involved
No pathways found





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