Gene description for Lyn
Gene name LYN proto-oncogene, Src family tyrosine kinase
Gene symbol Lyn
Other names/aliases p53Lyn
p56Lyn
Species Rattus norvegicus
 Database cross references - Lyn
ExoCarta ExoCarta_81515
Entrez Gene 81515
UniProt Q07014  
 Lyn identified in exosomes derived from the following tissue/cell type
Reticulocytes 21828046    
Reticulocytes 21828046    
 Gene ontology annotations for Lyn
Molecular Function
    kinase activity GO:0016301 TAS
    ATP binding GO:0005524 IEA
    non-membrane spanning protein tyrosine kinase activity GO:0004715 IBA
    protein kinase activity GO:0004672 ISO
    protein binding GO:0005515 IPI
    protein tyrosine kinase activity GO:0004713 ISO
    integrin binding GO:0005178 IDA
    ubiquitin protein ligase binding GO:0031625 IPI
    enzyme binding GO:0019899 ISO
    glycosphingolipid binding GO:0043208 IPI
    gamma-tubulin binding GO:0043015 IDA
    ion channel binding GO:0044325 ISO
    phosphoprotein binding GO:0051219 IPI
    platelet-derived growth factor receptor binding GO:0005161 IPI
    protein complex binding GO:0032403 ISO
    SH3 domain binding GO:0017124 ISO
    receptor binding GO:0005102 IPI
Biological Process
    erythrocyte differentiation GO:0030218 ISS
    response to insulin GO:0032868 IEP
    protein autophosphorylation GO:0046777 ISO
    negative regulation of intracellular signal transduction GO:1902532 ISS
    regulation of ERK1 and ERK2 cascade GO:0070372 ISS
    lipopolysaccharide-mediated signaling pathway GO:0031663 ISS
    regulation of mast cell activation GO:0033003 ISS
    response to drug GO:0042493 IEP
    positive regulation of phosphorylation GO:0042327 IMP
    dendritic cell differentiation GO:0097028 ISS
    negative regulation of cell proliferation GO:0008285 ISS
    cellular response to heat GO:0034605 IEP
    negative regulation of ERK1 and ERK2 cascade GO:0070373 ISS
    cellular response to peptide hormone stimulus GO:0071375 IBA
    response to toxic substance GO:0009636 IEP
    B cell homeostasis GO:0001782 ISS
    regulation of B cell receptor signaling pathway GO:0050855 ISS
    Fc receptor mediated stimulatory signaling pathway GO:0002431 ISS
    cellular response to extracellular stimulus GO:0031668 IEP
    positive regulation of Fc receptor mediated stimulatory signaling pathway GO:0060369 IMP
    innate immune response GO:0045087 IBA
    regulation of platelet aggregation GO:0090330 ISS
    immune response-regulating cell surface receptor signaling pathway GO:0002768 ISS
    positive regulation of peptidyl-tyrosine phosphorylation GO:0050731 ISO
    negative regulation of myeloid leukocyte differentiation GO:0002762 ISO
    regulation of cytokine secretion GO:0050707 ISO
    regulation of cell adhesion mediated by integrin GO:0033628 ISO
    response to carbohydrate GO:0009743 IEP
    positive regulation of glial cell proliferation GO:0060252 IDA
    negative regulation of B cell proliferation GO:0030889 ISO
    regulation of monocyte chemotaxis GO:0090025 ISO
    negative regulation of mast cell proliferation GO:0070667 ISS
    regulation of erythrocyte differentiation GO:0045646 ISS
    positive regulation of dendritic cell apoptotic process GO:2000670 ISS
    cellular response to DNA damage stimulus GO:0006974 ISO
    positive regulation of cellular component movement GO:0051272 ISO
    response to sterol depletion GO:0006991 IEP
    response to amino acid GO:0043200 IEP
    response to axon injury GO:0048678 IEP
    positive regulation of neuron projection development GO:0010976 ISO
    regulation of B cell apoptotic process GO:0002902 ISO
    response to hormone GO:0009725 ISS
    positive regulation of phosphatidylinositol 3-kinase activity GO:0043552 ISO
    cellular response to retinoic acid GO:0071300 ISO
    negative regulation of protein phosphorylation GO:0001933 ISS
    peptidyl-tyrosine autophosphorylation GO:0038083 IBA
    negative regulation of toll-like receptor 4 signaling pathway GO:0034144 ISS
    positive regulation of stress-activated protein kinase signaling cascade GO:0070304 ISO
    response to peptide hormone GO:0043434 IEP
    negative regulation of MAP kinase activity GO:0043407 ISS
    oligodendrocyte development GO:0014003 IEP
    peptidyl-tyrosine phosphorylation GO:0018108 ISO
    protein phosphorylation GO:0006468 ISO
    regulation of cytokine production GO:0001817 ISS
    transmembrane receptor protein tyrosine kinase signaling pathway GO:0007169 ISO
    positive regulation of oligodendrocyte progenitor proliferation GO:0070447 IMP
    hemopoiesis GO:0030097 ISO
    positive regulation of B cell receptor signaling pathway GO:0050861 ISO
    positive regulation of cell migration GO:0030335 ISO
    histamine secretion by mast cell GO:0002553 IMP
    positive regulation of tyrosine phosphorylation of STAT protein GO:0042531 ISS
    response to organic cyclic compound GO:0014070 IEP
    platelet degranulation GO:0002576 ISS
    Fc receptor mediated inhibitory signaling pathway GO:0002774 ISS
    regulation of inflammatory response GO:0050727 ISO
    tolerance induction to self antigen GO:0002513 ISS
    cytokine secretion GO:0050663 IMP
    regulation of mast cell degranulation GO:0043304 ISS
    regulation of release of sequestered calcium ion into cytosol GO:0051279 ISO
    intracellular signal transduction GO:0035556 ISO
    B cell receptor signaling pathway GO:0050853 ISO
    negative regulation of toll-like receptor 2 signaling pathway GO:0034136 ISS
    positive regulation of cell proliferation GO:0008284 ISS
    neuron projection development GO:0031175 ISO
    positive regulation of mast cell proliferation GO:0070668 ISO
Subcellular Localization
    perinuclear region of cytoplasm GO:0048471 ISO
    plasma membrane GO:0005886 ISO
    mitochondrial membrane GO:0031966 IDA
    integrin alpha2-beta1 complex GO:0034666 IDA
    Golgi apparatus GO:0005794 ISO
    membrane raft GO:0045121 ISO
    mitochondrial crista GO:0030061 IDA
    mast cell granule GO:0042629 IMP
    postsynaptic density GO:0014069 IDA
    extracellular exosome GO:0070062 ISO
    cell GO:0005623 ISO
    cell-cell adherens junction GO:0005913 IDA
    nucleus GO:0005634 ISS
    extrinsic component of cytoplasmic side of plasma membrane GO:0031234 IBA
    cytoplasm GO:0005737 ISS
    membrane GO:0016020 IDA
    mitochondrial intermembrane space GO:0005758 IDA
 Experiment description of studies that identified Lyn in exosomes
1
Experiment ID 96
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
2
Experiment ID 97
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
 Protein-protein interactions for Lyn
  Protein Interactor ExoCarta ID Identification method PubMed Species
No interactions are found.



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