Gene description for Clic4
Gene name chloride intracellular channel 4
Gene symbol Clic4
Other names/aliases -
Species Rattus norvegicus
 Database cross references - Clic4
ExoCarta ExoCarta_83718
Vesiclepedia VP_83718
Entrez Gene 83718
UniProt Q9Z0W7  
 Clic4 identified in exosomes derived from the following tissue/cell type
Reticulocytes 21828046    
Reticulocytes 21828046    
Urine 20535238    
 Gene ontology annotations for Clic4
Molecular Function
    voltage-gated ion channel activity GO:0005244 IEA
    chloride channel activity GO:0005254 IEA
    protein binding GO:0005515 IPI
    protein complex binding GO:0032403 IPI
Biological Process
    endothelial cell morphogenesis GO:0001886 ISO
    cellular response to calcium ion GO:0071277 ISO
    apoptotic process GO:0006915 IEA
    multicellular organism growth GO:0035264 ISO
    keratinocyte differentiation GO:0030216 ISO
    fertilization GO:0009566 ISO
    retina vasculature morphogenesis in camera-type eye GO:0061299 ISO
    regulation of ion transmembrane transport GO:0034765 IEA
    negative regulation of cell migration GO:0030336 ISS
    chloride transmembrane transport GO:1902476 IEA
    angiogenesis GO:0001525 ISO
    chloride transport GO:0006821 TAS
    vacuolar acidification GO:0007035 ISO
    branching morphogenesis of an epithelial tube GO:0048754 ISO
Subcellular Localization
    perinuclear region of cytoplasm GO:0048471 ISO
    endoplasmic reticulum GO:0005783 TAS
    mitochondrion GO:0005739 ISO
    chloride channel complex GO:0034707 IEA
    microtubule cytoskeleton GO:0015630 ISO
    extracellular exosome GO:0070062 ISO
    vesicle GO:0031982 TAS
    cell-cell junction GO:0005911 ISO
    apical part of cell GO:0045177 ISO
    cytoplasm GO:0005737 TAS
    nuclear matrix GO:0016363 ISO
    nucleus GO:0005634 IEA
    plasma membrane GO:0005886 ISO
    cell GO:0005623 ISO
    vacuole GO:0005773 ISO
    cytoplasmic vesicle membrane GO:0030659 IEA
    integral component of membrane GO:0016021 TAS
    intracellular GO:0005622 ISO
    microvillus GO:0005902 ISO
    cytosol GO:0005829 ISO
    midbody GO:0030496 ISO
    centrosome GO:0005813 ISO
    cell surface GO:0009986 ISO
 Experiment description of studies that identified Clic4 in exosomes
1
Experiment ID 97
MISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70|MHCI
EV Enriched markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
2
Experiment ID 98
MISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70|MHCI
EV Enriched markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D7 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.25 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
3
Experiment ID 192
MISEV standards
CEM
EV Biophysical techniques
TSG101|HSP70|CD63|CD81|FLOT
EV Enriched markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20535238    
Organism Rattus norvegicus
Experiment description Candidate biomarkers in exosome-like vesicles purified from rat and mouse urine samples.
Authors Conde-Vancells J, Rodriguez-Suarez E, Gonzalez E, Berisa A, Gil D, Embade N, Valle M, Luka Z, Elortza F, Wagner C, Lu SC, Mato JM, Falcon-Perez M.
Journal name Proteomics Clin Appl
Publication year 2010
Sample Urine
Sample name Urine - Rats of liver injury
Isolation/purification methods Differential centrifugation
Filtration
UltracentrifugationSucrose cushion
Sucrose density gradient
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for Clic4
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Actb 81822
Affinity Capture-MS Rattus norvegicus
Affinity Capture-Western Rattus norvegicus
2 Dnm1 140694
Affinity Capture-MS Rattus norvegicus
Affinity Capture-Western Rattus norvegicus
Reconstituted Complex Rattus norvegicus
3 Ywhae 29753
Affinity Capture-MS Rattus norvegicus
4 Ywhaz 25578
Reconstituted Complex Rattus norvegicus
Affinity Capture-MS Rattus norvegicus
Affinity Capture-Western Rattus norvegicus
Reconstituted Complex Rattus norvegicus
5 CAV1 857
Co-fractionation Homo sapiens
View the network image/svg+xml
 Pathways in which Clic4 is involved
No pathways found





Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here