Gene ontology annotations for Actb
Experiment description of studies that identified Actb in sEVs
1
Experiment ID
26
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
19109410
Organism
Mus musculus
Experiment description
Proteomic and immunologic analyses of brain tumor exosomes.
Authors
"Graner MW, Alzate O, Dechkovskaia AM, Keene JD, Sampson JH, Mitchell DA, Bigner DD"
Journal name
FASEB
Publication year
2008
Sample
Brain cancer cells
Sample name
SMA560vIII
Isolation/purification methods
Differential centrifugation Sucrose density gradient
Flotation density
1.13-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [MALDI TOF/TOF] Western blotting
2
Experiment ID
907
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✔
Negative markers
✔
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
37309723
Organism
Mus musculus
Experiment description
Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells
Authors
"Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S."
Journal name
Proteomics
Publication year
2023
Sample
Colon cancer cells
Sample name
C26
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
3
Experiment ID
311
MISEV standards
✘
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✔
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
33431899
Organism
Mus musculus
Experiment description
High-fat diet-induced upregulation of exosomal phosphatidylcholine contributes to insulin resistance
Authors
"Kumar A, Sundaram K, Mu J, Dryden GW, Sriwastva MK, Lei C, Zhang L, Qiu X, Xu F, Yan J, Zhang X, Park JW, Merchant ML, Bohler HCL, Wang B, Zhang S, Qin C, Xu Z, Han X, McClain CJ, Teng Y, Zhang HG."
Journal name
Nat Commun
Publication year
2021
Sample
Colorectal cancer cells
Sample name
MC38
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient centrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting
4
Experiment ID
312
MISEV standards
✘
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✔
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
33431899
Organism
Mus musculus
Experiment description
High-fat diet-induced upregulation of exosomal phosphatidylcholine contributes to insulin resistance
Authors
"Kumar A, Sundaram K, Mu J, Dryden GW, Sriwastva MK, Lei C, Zhang L, Qiu X, Xu F, Yan J, Zhang X, Park JW, Merchant ML, Bohler HCL, Wang B, Zhang S, Qin C, Xu Z, Han X, McClain CJ, Teng Y, Zhang HG."
Journal name
Nat Commun
Publication year
2021
Sample
Colorectal cancer cells
Sample name
MC38
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient centrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting
5
Experiment ID
3
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✔
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
10545503
Organism
Mus musculus
Experiment description
Molecular characterization of dendritic cell-derived exosomes. Selective accumulation of the heat shock protein hsc73.
Authors
"Thery C, Regnault A, Garin J, Wolfers J, Zitvogel L, Ricciardi-Castagnoli P, Raposo G, Amigorena S."
Journal name
JCB
Publication year
1999
Sample
Dendritic cells
Sample name
D1
Isolation/purification methods
Differential centrifugation Sucrose density gradient
Flotation density
1.14-1.20 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [MALDI TOF] Western blotting
6
Experiment ID
73
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
18494037
Organism
Mus musculus
Experiment description
Difference gel electrophoresis analysis of Ras-transformed fibroblast cell-derived exosomes.
Authors
"Ji H, Erfani N, Tauro BJ, Kapp EA, Zhu HJ, Moritz RL, Lim JW, Simpson RJ"
Journal name
ELEC
Publication year
2008
Sample
Embryonic fibroblasts
Sample name
NIH3T3
Isolation/purification methods
Differential centrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [LCQ DECA] Western blotting
7
Experiment ID
303
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✔
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
33431899
Organism
Mus musculus
Experiment description
High-fat diet-induced upregulation of exosomal phosphatidylcholine contributes to insulin resistance
Authors
"Kumar A, Sundaram K, Mu J, Dryden GW, Sriwastva MK, Lei C, Zhang L, Qiu X, Xu F, Yan J, Zhang X, Park JW, Merchant ML, Bohler HCL, Wang B, Zhang S, Qin C, Xu Z, Han X, McClain CJ, Teng Y, Zhang HG."
Journal name
Nat Commun
Publication year
2021
Sample
Faeces
Sample name
Intestinal epithelial cells - C57BL/6
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient centrifugation
Flotation density
-
Molecules identified in the study
Protein Lipid miRNA
Methods used in the study
Western blotting Mass spectrometry Immunofluorescence miRNA array HPLC
8
Experiment ID
303
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✔
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33431899
Organism
Mus musculus
Experiment description
High-fat diet-induced upregulation of exosomal phosphatidylcholine contributes to insulin resistance
Authors
"Kumar A, Sundaram K, Mu J, Dryden GW, Sriwastva MK, Lei C, Zhang L, Qiu X, Xu F, Yan J, Zhang X, Park JW, Merchant ML, Bohler HCL, Wang B, Zhang S, Qin C, Xu Z, Han X, McClain CJ, Teng Y, Zhang HG."
Journal name
Nat Commun
Publication year
2021
Sample
Faeces
Sample name
Intestinal epithelial cells - C57BL/6
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient centrifugation
Flotation density
-
Molecules identified in the study
Protein Lipid miRNA
Methods used in the study
Western blotting Mass spectrometry Immunofluorescence miRNA array HPLC
9
Experiment ID
304
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✔
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
33431899
Organism
Mus musculus
Experiment description
High-fat diet-induced upregulation of exosomal phosphatidylcholine contributes to insulin resistance
Authors
"Kumar A, Sundaram K, Mu J, Dryden GW, Sriwastva MK, Lei C, Zhang L, Qiu X, Xu F, Yan J, Zhang X, Park JW, Merchant ML, Bohler HCL, Wang B, Zhang S, Qin C, Xu Z, Han X, McClain CJ, Teng Y, Zhang HG."
Journal name
Nat Commun
Publication year
2021
Sample
Faeces
Sample name
Intestinal epithelial cells - C57BL/6
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient centrifugation
Flotation density
-
Molecules identified in the study
Protein Lipid miRNA
Methods used in the study
Western blotting Mass spectrometry Immunofluorescence miRNA array HPLC
10
Experiment ID
304
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✔
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33431899
Organism
Mus musculus
Experiment description
High-fat diet-induced upregulation of exosomal phosphatidylcholine contributes to insulin resistance
Authors
"Kumar A, Sundaram K, Mu J, Dryden GW, Sriwastva MK, Lei C, Zhang L, Qiu X, Xu F, Yan J, Zhang X, Park JW, Merchant ML, Bohler HCL, Wang B, Zhang S, Qin C, Xu Z, Han X, McClain CJ, Teng Y, Zhang HG."
Journal name
Nat Commun
Publication year
2021
Sample
Faeces
Sample name
Intestinal epithelial cells - C57BL/6
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient centrifugation
Flotation density
-
Molecules identified in the study
Protein Lipid miRNA
Methods used in the study
Western blotting Mass spectrometry Immunofluorescence miRNA array HPLC
11
Experiment ID
210
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23260141
Organism
Mus musculus
Experiment description
Exosomes Mediate Stromal Mobilization of Autocrine Wnt-PCP Signaling in Breast Cancer Cell Migration.
Authors
"Luga V, Zhang L, Viloria-Petit AM, Ogunjimi AA, Inanlou MR, Chiu E, Buchanan M, Hosein AN, Basik M, Wrana JL."
Journal name
Cell
Publication year
2012
Sample
Fibroblasts
Sample name
Normal-Fibroblasts (L cells)
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
12
Experiment ID
214
MISEV standards
✔
Biophysical techniques
✘
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23658846
Organism
Mus musculus
Experiment description
Immunomodulatory impact of leishmania-induced macrophage exosomes: a comparative proteomic and functional analysis.
Authors
"Hassani K, Olivier M."
Journal name
PLoS Negl Trop Dis
Publication year
2013
Sample
Macrophages
Sample name
Leishmania-infected-Macrophage (J774A.1)
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Filtration Protease inhibitors Sucrose density gradient Filtration Ultracentrifugation
Flotation density
1.13-1.19 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
13
Experiment ID
215
MISEV standards
✔
Biophysical techniques
✘
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23658846
Organism
Mus musculus
Experiment description
Immunomodulatory impact of leishmania-induced macrophage exosomes: a comparative proteomic and functional analysis.
Authors
"Hassani K, Olivier M."
Journal name
PLoS Negl Trop Dis
Publication year
2013
Sample
Macrophages
Sample name
LPS-treated-Macrophage (J774A.1)
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Filtration Protease inhibitors Sucrose density gradient Filtration Ultracentrifugation
Flotation density
1.13-1.19 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
14
Experiment ID
216
MISEV standards
✔
Biophysical techniques
✘
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23658846
Organism
Mus musculus
Experiment description
Immunomodulatory impact of leishmania-induced macrophage exosomes: a comparative proteomic and functional analysis.
Authors
"Hassani K, Olivier M."
Journal name
PLoS Negl Trop Dis
Publication year
2013
Sample
Macrophages
Sample name
Normal-Macrophage (J774A.1)
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Filtration Protease inhibitors Sucrose density gradient Filtration Ultracentrifugation
Flotation density
1.13-1.19 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
15
Experiment ID
5
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
11145662
Organism
Mus musculus
Experiment description
Mast cell-dependent B and T lymphocyte activation is mediated by the secretion of immunologically active exosomes.
Authors
"Skokos D, Le Panse S, Villa I, Rousselle JC, Peronet R, David B, Namane A, Mecheri S"
Journal name
JIMMU
Publication year
2001
Sample
Mast cells
Sample name
P815 MC9 Bone marrow-derived mast cells
Isolation/purification methods
Differential centrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [MALDI TOF] ELISA
16
Experiment ID
15
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
17486113
Organism
Mus musculus Homo sapiens
Experiment description
Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.
Authors
"Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO"
Journal name
NCB
Publication year
2007
Sample
Mast cells
Sample name
MC9 Bone marrow-derived mast cells HMC-1
Isolation/purification methods
Filtration Ultracentrifugation Sucrose density gradient
Flotation density
1.11-1.21 g/mL
Molecules identified in the study
Protein mRNA miRNA
Methods used in the study
Mass spectrometry [MALDI TOF] Western blotting Microarray miRCURY LNA Array
17
Experiment ID
15
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
mrna
Identification method
Microarray
PubMed ID
17486113
Organism
Mus musculus Homo sapiens
Experiment description
Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.
Authors
"Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO"
Journal name
NCB
Publication year
2007
Sample
Mast cells
Sample name
MC9 Bone marrow-derived mast cells HMC-1
Isolation/purification methods
Filtration Ultracentrifugation Sucrose density gradient
Flotation density
1.11-1.21 g/mL
Molecules identified in the study
Protein mRNA miRNA
Methods used in the study
Mass spectrometry [MALDI TOF] Western blotting Microarray miRCURY LNA Array
18
Experiment ID
1117
MISEV standards
✘
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✔
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
34957415
Organism
Mus musculus
Experiment description
Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism
Authors
"GarcÃa-Silva S, Benito-MartÃn A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÃ, Torres-Ruiz R, RodrÃguez-Perales S, MartÃnez L, Pérez-MartÃnez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, MartÃnez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, MegÃas D, Mehrara BJ, Lyden D, Peinado H."
Journal name
Nat Cancer
Publication year
2021
Sample
Melanoma cells
Sample name
B16-F1R2
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
19
Experiment ID
1118
MISEV standards
✘
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✔
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
34957415
Organism
Mus musculus
Experiment description
Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism
Authors
"GarcÃa-Silva S, Benito-MartÃn A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÃ, Torres-Ruiz R, RodrÃguez-Perales S, MartÃnez L, Pérez-MartÃnez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, MartÃnez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, MegÃas D, Mehrara BJ, Lyden D, Peinado H."
Journal name
Nat Cancer
Publication year
2021
Sample
Melanoma cells
Sample name
B16-F1R2
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
20
Experiment ID
39
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
15210972
Organism
Mus musculus
Experiment description
Cells release prions in association with exosomes.
Authors
"Fevrier B, Vilette D, Archer F, Loew D, Faigle W, Vidal M, Laude H, Raposo G"
Journal name
PNAS
Publication year
2004
Sample
Mov neuroglial cells
Sample name
Mov neuroglial cell
Isolation/purification methods
Differential centrifugation Sucrose density gradient
Flotation density
1.14 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [QSTAR] Western blotting Immunoelectron Microscopy
21
Experiment ID
262
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✔
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
25242146
Organism
Mus musculus
Experiment description
Extracellular Vesicles from Neural Stem Cells Transfer IFN-? via Ifngr1 to Activate Stat1 Signaling in Target Cells
Authors
"Chiara Cossetti, Nunzio Iraci, Tim R. Mercer, Tommaso Leonardi, Emanuele Alpi, Denise Drago, Clara Alfaro-Cervello, Harpreet K. Saini, Matthew P. Davis, Julia Schaeffer, Beatriz Vega, Matilde Stefanini, CongJian Zhao, Werner Muller, Jose Manuel Garcia-Verdugo, Suresh Mathivanan, Angela Bachi, Anton J. Enright, John S. Mattick, Stefano Pluchino"
Journal name
Molecular Cell
Publication year
2014
Sample
Neural stem cells
Sample name
NPCs
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
1.13-1.20 g/mL
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry Microarray
22
Experiment ID
263
MISEV standards
✘
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
25242146
Organism
Mus musculus
Experiment description
Extracellular Vesicles from Neural Stem Cells Transfer IFN-? via Ifngr1 to Activate Stat1 Signaling in Target Cells
Authors
"Chiara Cossetti, Nunzio Iraci, Tim R. Mercer, Tommaso Leonardi, Emanuele Alpi, Denise Drago, Clara Alfaro-Cervello, Harpreet K. Saini, Matthew P. Davis, Julia Schaeffer, Beatriz Vega, Matilde Stefanini, CongJian Zhao, Werner Muller, Jose Manuel Garcia-Verdugo, Suresh Mathivanan, Angela Bachi, Anton J. Enright, John S. Mattick, Stefano Pluchino"
Journal name
Molecular Cell
Publication year
2014
Sample
Neural stem cells
Sample name
NPCs - Th1 treated
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
1.13-1.20 g/mL
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
23
Experiment ID
264
MISEV standards
✘
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
25242146
Organism
Mus musculus
Experiment description
Extracellular Vesicles from Neural Stem Cells Transfer IFN-? via Ifngr1 to Activate Stat1 Signaling in Target Cells
Authors
"Chiara Cossetti, Nunzio Iraci, Tim R. Mercer, Tommaso Leonardi, Emanuele Alpi, Denise Drago, Clara Alfaro-Cervello, Harpreet K. Saini, Matthew P. Davis, Julia Schaeffer, Beatriz Vega, Matilde Stefanini, CongJian Zhao, Werner Muller, Jose Manuel Garcia-Verdugo, Suresh Mathivanan, Angela Bachi, Anton J. Enright, John S. Mattick, Stefano Pluchino"
Journal name
Molecular Cell
Publication year
2014
Sample
Neural stem cells
Sample name
NPCs - Th2 treated
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
1.13-1.20 g/mL
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
24
Experiment ID
33
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
21136642
Organism
Mus musculus
Experiment description
Oligodendrocytes secrete exosomes containing major myelin and stress-protective proteins: Trophic support for axons?
Authors
"Kramer-Albers EM, Bretz N, Tenzer S, Winterstein C, Mobius W, Berger H, Nave KA, Schild H, Trotter J"
Journal name
PROTEOMICS_CL
Publication year
2007
Sample
Oligodendrocytes
Sample name
Oligodendrocytes Oli-neu
Isolation/purification methods
Differential centrifugation Sucrose density gradient
Flotation density
1.10-1.14 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [QTOF] Western blotting Immunoelectron Microscopy
25
Experiment ID
1321
MISEV standards
Biophysical techniques
✘
Enriched markers
✘
Negative markers
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
33785738
Organism
Homo sapiens
Experiment description
Selective packaging of mitochondrial proteins into extracellular vesicles prevents the release of mitochondrial DAMPs
Authors
"Todkar K, Chikhi L, Desjardins V, El-Mortada F, Pépin G, Germain M. "
Journal name
Nat Commun
Publication year
2021
Sample
Osteosarcoma cells
Sample name
U2OS
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting
26
Experiment ID
1322
MISEV standards
Biophysical techniques
✘
Enriched markers
✘
Negative markers
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
33785738
Organism
Homo sapiens
Experiment description
Selective packaging of mitochondrial proteins into extracellular vesicles prevents the release of mitochondrial DAMPs
Authors
"Todkar K, Chikhi L, Desjardins V, El-Mortada F, Pépin G, Germain M. "
Journal name
Nat Commun
Publication year
2021
Sample
Osteosarcoma cells
Sample name
U2OS
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting
27
Experiment ID
1323
MISEV standards
Biophysical techniques
✘
Enriched markers
✘
Negative markers
Particle analysis
Identified molecule
protein
Identification method
Western blotting
PubMed ID
33785738
Organism
Homo sapiens
Experiment description
Selective packaging of mitochondrial proteins into extracellular vesicles prevents the release of mitochondrial DAMPs
Authors
"Todkar K, Chikhi L, Desjardins V, El-Mortada F, Pépin G, Germain M. "
Journal name
Nat Commun
Publication year
2021
Sample
Osteosarcoma cells
Sample name
U2OS
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting
28
Experiment ID
188
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
19351151
Organism
Mus musculus
Experiment description
Characterization of vesicles secreted from insulinoma NIT-1 cells.
Authors
"Lee HS, Jeong J, Lee KJ."
Journal name
J Proteome Res
Publication year
2009
Sample
Pancreatic cells
Sample name
Pancreatic beta cell (NIT-1)
Isolation/purification methods
Differential centrifugation Sucrose density gradient
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
29
Experiment ID
908
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✔
Negative markers
✔
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
37309723
Organism
Mus musculus
Experiment description
Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells
Authors
"Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S."
Journal name
Proteomics
Publication year
2023
Sample
T-cell lymphoma cells
Sample name
EL4
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
30
Experiment ID
34
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
19190083
Organism
Homo sapiens
Experiment description
Characterization of exosome-like vesicles released from human tracheobronchial ciliated epithelium: a possible role in innate defense.
Authors
"Kesimer M, Scull M, Brighton B, Demaria G, Burns K, O'Neal W, Pickles RJ, Sheehan JK"
Journal name
FASEB
Publication year
2009
Sample
Tracheobronchial cells
Sample name
Tracheobronchial epithelial cells
Isolation/purification methods
Differential centrifugation Filtration Sucrose density gradient
Flotation density
1.16 -1.18 g/mL
Molecules identified in the study
Protein mRNA
Methods used in the study
Mass spectrometry [QTOF] Western blotting Immunoelectron Microscopy FACS
Protein-protein interactions for Actb
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
Rps3
27050
Co-fractionation
Mus musculus
2
ABCG2
9429
Affinity Capture-MS
Homo sapiens
3
MVP
9961
Affinity Capture-MS
Homo sapiens
4
SRGAP1
57522
Affinity Capture-MS
Homo sapiens
5
ACTR2
10097
Affinity Capture-MS
Homo sapiens
6
ARHGAP21
57584
Affinity Capture-MS
Homo sapiens
7
ABLIM1
3983
Affinity Capture-MS
Homo sapiens
8
AP2B1
163
Affinity Capture-MS
Homo sapiens
9
Pknox1
Affinity Capture-MS
Mus musculus
10
IMMT
10989
Affinity Capture-MS
Homo sapiens
11
CCT3
7203
Affinity Capture-MS
Homo sapiens
12
RAB1A
5861
Affinity Capture-MS
Homo sapiens
13
AAK1
22848
Affinity Capture-MS
Homo sapiens
14
VAPA
9218
Affinity Capture-MS
Homo sapiens
15
Inadl
Affinity Capture-MS
Mus musculus
16
CPM
1368
Affinity Capture-MS
Homo sapiens
17
ARPC2
10109
Affinity Capture-MS
Homo sapiens
18
KCTD10
83892
Affinity Capture-MS
Homo sapiens
19
CLTA
1211
Affinity Capture-MS
Homo sapiens
20
Cotl1
72042
Two-hybrid
Mus musculus
Reconstituted Complex
Mus musculus
21
TPM2
7169
Affinity Capture-MS
Homo sapiens
22
CAP1
10487
Affinity Capture-MS
Homo sapiens
23
Ybx1
22608
Co-fractionation
Mus musculus
24
AFAP1
60312
Affinity Capture-MS
Homo sapiens
25
DBN1
1627
Affinity Capture-MS
Homo sapiens
26
LIMA1
51474
Affinity Capture-MS
Homo sapiens
27
EPS15
2060
Affinity Capture-MS
Homo sapiens
28
INF2
64423
Affinity Capture-MS
Homo sapiens
29
LGALS1
3956
Affinity Capture-MS
Homo sapiens
30
SRGAP2
23380
Affinity Capture-MS
Homo sapiens
31
CCT4
10575
Affinity Capture-MS
Homo sapiens
32
BASP1
10409
Affinity Capture-MS
Homo sapiens
33
Rps6
20104
Co-fractionation
Mus musculus
34
Mks1
Affinity Capture-MS
Mus musculus
35
RAB14
51552
Affinity Capture-MS
Homo sapiens
36
CFL1
1072
Two-hybrid
Homo sapiens
37
CLTB
1212
Affinity Capture-MS
Homo sapiens
38
RPL22
6146
Affinity Capture-MS
Homo sapiens
39
Tmem173
Proximity Label-MS
Mus musculus
40
CAPZB
832
Affinity Capture-MS
Homo sapiens
41
Cyfip1
20430
Affinity Capture-MS
Mus musculus
42
PPP1R12A
4659
Affinity Capture-MS
Homo sapiens
43
Ywhab
54401
Co-fractionation
Mus musculus
44
COL5A1
1289
Affinity Capture-MS
Homo sapiens
45
MYO5B
4645
Affinity Capture-MS
Homo sapiens
46
DCTN4
51164
Affinity Capture-MS
Homo sapiens
47
ACTR3
10096
Affinity Capture-MS
Homo sapiens
48
AP2A1
160
Affinity Capture-MS
Homo sapiens
49
TRMT112
51504
Affinity Capture-MS
Homo sapiens
50
Invs
Affinity Capture-MS
Mus musculus
51
PPP1R18
170954
Affinity Capture-MS
Homo sapiens
52
Rpl26
19941
Co-fractionation
Mus musculus
53
STOM
2040
Affinity Capture-MS
Homo sapiens
54
CD109
135228
Affinity Capture-MS
Homo sapiens
55
ERC1
23085
Affinity Capture-MS
Homo sapiens
56
SPECC1L
23384
Affinity Capture-MS
Homo sapiens
57
Tagln2
21346
Co-fractionation
Mus musculus
58
CHCHD3
54927
Affinity Capture-MS
Homo sapiens
59
PHLDB2
90102
Affinity Capture-MS
Homo sapiens
60
Set
56086
Affinity Capture-MS
Mus musculus
61
RALA
5898
Affinity Capture-MS
Homo sapiens
62
CEP162
Affinity Capture-MS
Homo sapiens
63
MYO1B
4430
Affinity Capture-MS
Homo sapiens
64
TMOD1
Affinity Capture-MS
Homo sapiens
65
SRI
6717
Affinity Capture-MS
Homo sapiens
66
Lipc
Affinity Capture-MS
Mus musculus
67
TPRN
286262
Affinity Capture-MS
Homo sapiens
68
Eed
Affinity Capture-MS
Mus musculus
69
ZNF598
90850
Affinity Capture-MS
Homo sapiens
70
GTSE1
51512
Affinity Capture-MS
Homo sapiens
71
ARPC5L
81873
Affinity Capture-MS
Homo sapiens
72
Pde4dip
Affinity Capture-MS
Mus musculus
73
PLS3
5358
Affinity Capture-MS
Homo sapiens
74
CYBRD1
79901
Affinity Capture-MS
Homo sapiens
75
TES
26136
Affinity Capture-MS
Homo sapiens
76
Rps4x
20102
Co-fractionation
Mus musculus
77
STAMBPL1
Affinity Capture-MS
Homo sapiens
78
Rac1
19353
Co-fractionation
Mus musculus
79
COBL
Affinity Capture-MS
Homo sapiens
80
STOML2
30968
Affinity Capture-MS
Homo sapiens
81
PFN1
5216
Affinity Capture-MS
Homo sapiens
82
PPP1CA
5499
Affinity Capture-MS
Homo sapiens
83
NOLC1
9221
Affinity Capture-MS
Homo sapiens
84
CPNE2
221184
Two-hybrid
Homo sapiens
85
TCP1
6950
Affinity Capture-MS
Homo sapiens
86
KIAA1211
Affinity Capture-MS
Homo sapiens
87
Tfe3
Affinity Capture-MS
Mus musculus
88
EFHD2
79180
Affinity Capture-MS
Homo sapiens
89
CAPZA1
829
Affinity Capture-MS
Homo sapiens
90
NCKIPSD
51517
Affinity Capture-MS
Homo sapiens
91
PSMD4
5710
Affinity Capture-MS
Homo sapiens
92
SORBS2
Affinity Capture-MS
Homo sapiens
93
LUZP1
7798
Affinity Capture-MS
Homo sapiens
94
Kcnma1
Affinity Capture-MS
Mus musculus
95
SIPA1L1
26037
Affinity Capture-MS
Homo sapiens
96
Mt3
Affinity Capture-MS
Mus musculus
97
GNAI1
2770
Affinity Capture-MS
Homo sapiens
98
CLTCL1
8218
Affinity Capture-MS
Homo sapiens
99
ALPI
Affinity Capture-MS
Homo sapiens
100
RRAS2
22800
Affinity Capture-MS
Homo sapiens
101
LRRFIP2
9209
Affinity Capture-MS
Homo sapiens
102
SNX33
257364
Affinity Capture-MS
Homo sapiens
103
CHMP4B
128866
Affinity Capture-MS
Homo sapiens
104
LRRFIP1
9208
Affinity Capture-MS
Homo sapiens
105
ACTN4
81
Affinity Capture-MS
Homo sapiens
106
MYO10
4651
Affinity Capture-MS
Homo sapiens
107
ARHGAP11A
Affinity Capture-MS
Homo sapiens
108
FLNB
2317
Affinity Capture-MS
Homo sapiens
109
BMP2K
55589
Affinity Capture-MS
Homo sapiens
110
Tpt1
22070
Co-fractionation
Mus musculus
111
GNAI2
2771
Affinity Capture-MS
Homo sapiens
112
ARPC5
10092
Affinity Capture-MS
Homo sapiens
113
PIK3C2A
5286
Affinity Capture-MS
Homo sapiens
114
STON2
85439
Affinity Capture-MS
Homo sapiens
115
Ahi1
Affinity Capture-MS
Mus musculus
116
ACTR10
55860
Affinity Capture-MS
Homo sapiens
117
FLOT2
2319
Affinity Capture-MS
Homo sapiens
118
PICALM
8301
Affinity Capture-MS
Homo sapiens
119
ARPC1A
10552
Affinity Capture-MS
Homo sapiens
120
ACTG1
71
Affinity Capture-MS
Homo sapiens
121
ST5
6764
Affinity Capture-MS
Homo sapiens
122
GPRC5A
9052
Affinity Capture-MS
Homo sapiens
123
CPNE4
131034
Two-hybrid
Homo sapiens
Reconstituted Complex
Homo sapiens
124
PPP1R12B
4660
Affinity Capture-MS
Homo sapiens
125
MAT2A
4144
Affinity Capture-MS
Homo sapiens
126
DST
667
Affinity Capture-MS
Homo sapiens
127
CSNK1G3
1456
Affinity Capture-MS
Homo sapiens
128
GTF3C3
9330
Affinity Capture-MS
Homo sapiens
129
CLINT1
9685
Affinity Capture-MS
Homo sapiens
130
Pfn2
Affinity Capture-MS
Mus musculus
Reconstituted Complex
Mus musculus
131
ARPC1B
10095
Affinity Capture-MS
Homo sapiens
132
UBAP2
55833
Affinity Capture-MS
Homo sapiens
133
Prom1
Affinity Capture-Western
Mus musculus
134
Rps8
20116
Co-fractionation
Mus musculus
135
LMO7
4008
Affinity Capture-MS
Homo sapiens
136
AHNAK
79026
Affinity Capture-MS
Homo sapiens
137
Rps28
54127
Co-fractionation
Mus musculus
138
TJP1
7082
Affinity Capture-MS
Homo sapiens
139
ACTBL2
345651
Affinity Capture-MS
Homo sapiens
140
CTTN
2017
Affinity Capture-MS
Homo sapiens
141
SPECC1
92521
Affinity Capture-MS
Homo sapiens
142
MYO5A
4644
Affinity Capture-MS
Homo sapiens
143
MYO19
Affinity Capture-MS
Homo sapiens
144
MYL6B
140465
Affinity Capture-MS
Homo sapiens
145
Wasf3
Co-fractionation
Mus musculus
146
HIP1R
9026
Affinity Capture-MS
Homo sapiens
147
MYO5C
55930
Affinity Capture-MS
Homo sapiens
148
MYO1C
4641
Affinity Capture-MS
Homo sapiens
149
Rpl22
19934
Co-fractionation
Mus musculus
150
AP2M1
1173
Affinity Capture-MS
Homo sapiens
151
RAI14
26064
Affinity Capture-MS
Homo sapiens
152
Nphp4
Affinity Capture-MS
Mus musculus
153
GNA11
2767
Affinity Capture-MS
Homo sapiens
154
TPM1
7168
Affinity Capture-MS
Homo sapiens
155
Traf6
Affinity Capture-MS
Mus musculus
Affinity Capture-Western
Mus musculus
156
CORO2A
Affinity Capture-MS
Homo sapiens
157
Ipo9
Affinity Capture-Western
Mus musculus
158
TJP2
9414
Affinity Capture-MS
Homo sapiens
159
MYO6
4646
Affinity Capture-MS
Homo sapiens
160
FCHO2
115548
Affinity Capture-MS
Homo sapiens
161
Usp25
30940
Affinity Capture-MS
Mus musculus
162
Dmrt2
Affinity Capture-MS
Mus musculus
163
SEC16A
9919
Affinity Capture-MS
Homo sapiens
164
Syncrip
56403
Co-fractionation
Mus musculus
165
TMOD3
29766
Affinity Capture-MS
Homo sapiens
166
AP2A2
161
Affinity Capture-MS
Homo sapiens
167
Rps3a1
20091
Co-fractionation
Mus musculus
168
Atp6v1a
11964
Affinity Capture-Western
Mus musculus
169
CGN
Affinity Capture-MS
Homo sapiens
170
FLII
2314
Affinity Capture-MS
Homo sapiens
171
TWF1
5756
Affinity Capture-MS
Homo sapiens
172
AKAP2
11217
Affinity Capture-MS
Homo sapiens
173
CLTC
1213
Affinity Capture-MS
Homo sapiens
174
MPRIP
23164
Affinity Capture-MS
Homo sapiens
175
KIDINS220
57498
Affinity Capture-MS
Homo sapiens
176
LIMCH1
22998
Affinity Capture-MS
Homo sapiens
177
TRIOBP
11078
Affinity Capture-MS
Homo sapiens
178
TPM4
7171
Affinity Capture-MS
Homo sapiens
179
TWF2
11344
Affinity Capture-MS
Homo sapiens
180
FLOT1
10211
Affinity Capture-MS
Homo sapiens
181
Park2
Affinity Capture-Western
Mus musculus
182
Fancd2
Affinity Capture-MS
Mus musculus
183
TPM3
7170
Affinity Capture-MS
Homo sapiens
184
SPTBN1
6711
Affinity Capture-MS
Homo sapiens
185
Rps27a
78294
Co-fractionation
Mus musculus
186
GSN
2934
Affinity Capture-MS
Homo sapiens
187
SEC24B
10427
Affinity Capture-MS
Homo sapiens
188
ARPC3
10094
Affinity Capture-MS
Homo sapiens
189
SNCA
6622
Affinity Capture-MS
Homo sapiens
190
NEXN
91624
Affinity Capture-MS
Homo sapiens
191
SPTAN1
6709
Affinity Capture-MS
Homo sapiens
192
CLIC1
1192
Affinity Capture-MS
Homo sapiens
193
CCT8
10694
Affinity Capture-MS
Homo sapiens
194
DAB2
1601
Affinity Capture-MS
Homo sapiens
195
KIAA0753
Affinity Capture-MS
Homo sapiens
196
SVIL
6840
Affinity Capture-MS
Homo sapiens
197
CDC42
998
Affinity Capture-MS
Homo sapiens
198
SIPA1
6494
Affinity Capture-MS
Homo sapiens
199
RUVBL2
10856
Affinity Capture-MS
Homo sapiens
200
Ube2i
Two-hybrid
Mus musculus
201
MISP
126353
Affinity Capture-MS
Homo sapiens
202
XPR1
9213
Affinity Capture-MS
Homo sapiens
203
SIPA1L3
Affinity Capture-MS
Homo sapiens
204
Kctd13
Affinity Capture-MS
Mus musculus
205
CAPZA2
830
Affinity Capture-MS
Homo sapiens
206
Pfn1
18643
Affinity Capture-MS
Mus musculus
Two-hybrid
Mus musculus
207
DCTN2
10540
Affinity Capture-MS
Homo sapiens
208
CAP2
10486
Affinity Capture-MS
Homo sapiens
209
ITPR3
3710
Affinity Capture-MS
Homo sapiens
210
EIF4ENIF1
56478
Two-hybrid
Homo sapiens
211
Iqcb1
Affinity Capture-MS
Mus musculus
212
Unk
Affinity Capture-RNA
Mus musculus
213
CPNE1
8904
Two-hybrid
Homo sapiens
Reconstituted Complex
Homo sapiens
214
OXR1
Affinity Capture-MS
Homo sapiens
215
UNC45A
55898
Affinity Capture-MS
Homo sapiens
216
ACTA1
58
Affinity Capture-MS
Homo sapiens
217
RUVBL1
8607
Affinity Capture-MS
Homo sapiens
218
LRCH3
84859
Affinity Capture-MS
Homo sapiens
219
MICAL3
57553
Affinity Capture-MS
Homo sapiens
220
Syn2
Co-fractionation
Mus musculus
221
SYNPO
11346
Affinity Capture-MS
Homo sapiens
222
DAPK3
1613
Affinity Capture-MS
Homo sapiens
223
FLNA
2316
Affinity Capture-MS
Homo sapiens
224
Rps14
20044
Co-fractionation
Mus musculus
225
GNAS
2778
Affinity Capture-MS
Homo sapiens
226
MYO1E
4643
Affinity Capture-MS
Homo sapiens
227
DOCK7
85440
Affinity Capture-MS
Homo sapiens
228
Rnf2
Affinity Capture-MS
Mus musculus
229
Tubb5
22154
Co-fractionation
Mus musculus
230
RAB5C
5878
Affinity Capture-MS
Homo sapiens
231
GAS2L1
10634
Affinity Capture-MS
Homo sapiens
232
Nphp1
Affinity Capture-MS
Mus musculus
233
MYO18A
399687
Affinity Capture-MS
Homo sapiens
234
DSG2
1829
Affinity Capture-MS
Homo sapiens
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Pathways in which Actb is involved