Gene description for SOCS3
Gene name suppressor of cytokine signaling 3
Gene symbol SOCS3
Other names/aliases ATOD4
CIS3
Cish3
SOCS-3
SSI-3
SSI3
Species Homo sapiens
 Database cross references - SOCS3
ExoCarta ExoCarta_9021
Vesiclepedia VP_9021
Entrez Gene 9021
HGNC 19391
MIM 604176
UniProt O14543  
 SOCS3 identified in sEVs derived from the following tissue/cell type
Hepatocellular carcinoma cells 26054723    
Hepatocellular carcinoma cells 26054723    
Hepatocellular carcinoma cells 26054723    
Hepatocytes 26054723    
 Gene ontology annotations for SOCS3
Molecular Function
    phosphotyrosine residue binding GO:0001784 IEA
    protein kinase inhibitor activity GO:0004860 TAS
    cytokine receptor binding GO:0005126 IBA
    protein binding GO:0005515 IPI
    protein tyrosine kinase inhibitor activity GO:0030292 IDA
    miRNA binding GO:0035198 IEA
Biological Process
    protein ubiquitination GO:0016567 IEA
    cytokine-mediated signaling pathway GO:0019221 IBA
    intracellular signal transduction GO:0035556 IEA
    negative regulation of apoptotic process GO:0043066 TAS
    positive regulation of cell differentiation GO:0045597 IEA
    negative regulation of receptor signaling pathway via JAK-STAT GO:0046426 IBA
    negative regulation of receptor signaling pathway via JAK-STAT GO:0046426 IMP
    negative regulation of insulin receptor signaling pathway GO:0046627 IEA
    negative regulation of inflammatory response GO:0050728 IEA
    branching involved in labyrinthine layer morphogenesis GO:0060670 IEA
    placenta blood vessel development GO:0060674 IEA
    T-helper 17 cell lineage commitment GO:0072540 TAS
    cellular response to interleukin-17 GO:0097398 IEA
    cellular response to leukemia inhibitory factor GO:1990830 IEA
Subcellular Localization
    cytosol GO:0005829 TAS
    cytosol GO:0005829 TAS
    cytoplasmic side of plasma membrane GO:0009898 IDA
 Experiment description of studies that identified SOCS3 in sEVs
1
Experiment ID 234
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-C3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
2
Experiment ID 235
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
3
Experiment ID 236
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name MHCC97L
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
4
Experiment ID 237
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocytes
Sample name MIHA
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RNA Sequencing
 Protein-protein interactions for SOCS3
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 ETV6  
Affinity Capture-Western Homo sapiens
2 TCEB1 6921
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
3 TNFSF10 8743
Affinity Capture-Western Homo sapiens
4 KIAA1958  
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
5 REL 5966
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
6 DAB1 1600
Affinity Capture-Western Homo sapiens
7 VHL  
Affinity Capture-Western Homo sapiens
8 GFRA1 2674
Two-hybrid Homo sapiens
9 APP 351
Reconstituted Complex Homo sapiens
10 FGFR3 2261
Affinity Capture-Western Homo sapiens
11 NFKB1 4790
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
12 MAP3K5 4217
Affinity Capture-Western Homo sapiens
13 IL6ST 3572
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Protein-peptide Homo sapiens
Biochemical Activity Homo sapiens
14 DDA1  
Affinity Capture-MS Homo sapiens
15 YES1 7525
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
16 CUEDC2  
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
17 RCAN1  
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
18 EPOR  
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
19 MAPK11  
Two-hybrid Homo sapiens
20 ERBB2 2064
Reconstituted Complex Homo sapiens
21 TES 26136
Two-hybrid Homo sapiens
22 RBMX 27316
Two-hybrid Homo sapiens
23 KIT 3815
Reconstituted Complex Homo sapiens
24 JAK3 3718
Affinity Capture-Western Homo sapiens
25 CUL4B 8450
Affinity Capture-MS Homo sapiens
26 IGF1R 3480
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
27 ERBB3 2065
Reconstituted Complex Homo sapiens
28 ACADVL 37
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
29 HIVEP1 3096
Two-hybrid Homo sapiens
30 NONO 4841
Affinity Capture-Western Homo sapiens
31 MAPK8IP1 9479
Affinity Capture-Western Homo sapiens
32 PTK6  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
33 TFDP1  
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
34 PTK2B 2185
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
35 NFKBIA  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
36 TXNDC11 51061
Two-hybrid Homo sapiens
37 TFR2 7036
Two-hybrid Homo sapiens
38 PTPN11 5781
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
39 Rnf7  
Affinity Capture-Western Mus musculus
40 SOCS2  
Affinity Capture-Western Homo sapiens
41 CXCR4 7852
Affinity Capture-Western Homo sapiens
42 AMBRA1  
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
43 RGP1 9827
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
44 Tceb1  
Affinity Capture-Western Mus musculus
45 TRAF6 7189
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
46 ERBB4 2066
Reconstituted Complex Homo sapiens
47 EGFR 1956
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
PCA Homo sapiens
Affinity Capture-Luminescence Homo sapiens
48 PTK2 5747
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
49 PDPK1 5170
Two-hybrid Homo sapiens
50 MAP3K7  
Affinity Capture-Western Homo sapiens
51 GAB1  
Reconstituted Complex Homo sapiens
52 BLK 640
Two-hybrid Homo sapiens
53 LEPR 3953
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
54 MAPK6  
Two-hybrid Homo sapiens
55 JAK1 3716
Affinity Capture-Western Homo sapiens
Biochemical Activity Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
56 PRLR  
Affinity Capture-Western Homo sapiens
57 MET 4233
Reconstituted Complex Homo sapiens
58 TCEB2 6923
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
59 IL2RB  
Reconstituted Complex Homo sapiens
60 IL12RB2  
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
61 NFATC2  
Reconstituted Complex Homo sapiens
62 CSF1R  
Affinity Capture-Western Homo sapiens
63 Tceb2 67673
Affinity Capture-Western Mus musculus
64 RASA1 5921
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
65 RELA 5970
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
66 PLS1 5357
Affinity Capture-MS Homo sapiens
67 MAP1S 55201
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
68 NME4 4833
Two-hybrid Homo sapiens
69 RNF31 55072
Two-hybrid Homo sapiens
70 IRS2 8660
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
71 LCK 3932
Affinity Capture-Western Homo sapiens
72 ABL1 25
Affinity Capture-Western Homo sapiens
73 INSR 3643
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
74 ELAVL1 1994
Affinity Capture-RNA Homo sapiens
75 RNF7  
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
76 BIK  
Two-hybrid Homo sapiens
77 TBK1 29110
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
78 PIN1 5300
Two-hybrid Homo sapiens
79 SIGLEC7  
Affinity Capture-Western Homo sapiens
80 RPL7A 6130
Two-hybrid Homo sapiens
81 GHR  
Reconstituted Complex Homo sapiens
82 AR 367
Reconstituted Complex Homo sapiens
83 PTRF 284119
Protein-peptide Homo sapiens
Affinity Capture-Western Homo sapiens
84 JAK2 3717
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Biochemical Activity Homo sapiens
85 IRS1 3667
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
86 Cul5 75717
Affinity Capture-Western Mus musculus
87 CSN3 1448
Affinity Capture-Western Homo sapiens
88 CUL5 8065
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
View the network image/svg+xml
 Pathways in which SOCS3 is involved
PathwayEvidenceSource
Adaptive Immune System TAS Reactome
Antigen processing: Ubiquitination & Proteasome degradation TAS Reactome
Class I MHC mediated antigen processing & presentation TAS Reactome
Cytokine Signaling in Immune system TAS Reactome
Cytokine Signaling in Immune system IEA Reactome
Gene expression (Transcription) IEA Reactome
Generic Transcription Pathway IEA Reactome
Growth hormone receptor signaling IEA Reactome
Immune System TAS Reactome
Immune System IEA Reactome
Inactivation of CSF3 (G-CSF) signaling IEA Reactome
Inactivation of CSF3 (G-CSF) signaling TAS Reactome
Interferon alpha/beta signaling TAS Reactome
Interferon alpha/beta signaling IEA Reactome
Interferon gamma signaling TAS Reactome
Interferon Signaling TAS Reactome
Interferon Signaling IEA Reactome
Interleukin-4 and Interleukin-13 signaling TAS Reactome
Interleukin-6 family signaling TAS Reactome
Interleukin-6 signaling TAS Reactome
Metabolism of proteins TAS Reactome
Neddylation TAS Reactome
Post-translational protein modification TAS Reactome
PTK6 Activates STAT3 TAS Reactome
Regulation of IFNA/IFNB signaling IEA Reactome
Regulation of IFNG signaling TAS Reactome
RNA Polymerase II Transcription IEA Reactome
RUNX1 regulates transcription of genes involved in differentiation of keratinocytes IEA Reactome
Signal Transduction IEA Reactome
Signal Transduction TAS Reactome
Signaling by CSF3 (G-CSF) IEA Reactome
Signaling by CSF3 (G-CSF) TAS Reactome
Signaling by Interleukins TAS Reactome
Signaling by Leptin IEA Reactome
Signaling by Non-Receptor Tyrosine Kinases TAS Reactome
Signaling by PTK6 TAS Reactome
Transcriptional regulation by RUNX1 IEA Reactome





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