Gene description for ZMYND11
Gene name zinc finger, MYND-type containing 11
Gene symbol ZMYND11
Other names/aliases BRAM1
BS69
MRD30
Species Homo sapiens
 Database cross references - ZMYND11
ExoCarta ExoCarta_10771
Vesiclepedia VP_10771
Entrez Gene 10771
HGNC 16966
MIM 608668
UniProt Q15326  
 ZMYND11 identified in sEVs derived from the following tissue/cell type
Hepatocellular carcinoma cells 26054723    
 Gene ontology annotations for ZMYND11
Molecular Function
    double-stranded DNA binding GO:0003690 IDA
    transcription corepressor activity GO:0003714 ISS
    protein binding GO:0005515 IPI
    zinc ion binding GO:0008270 IDA
    zinc ion binding GO:0008270 ISS
    methylated histone binding GO:0035064 IBA
    methylated histone binding GO:0035064 IDA
    methylated histone binding GO:0035064 ISS
Biological Process
    chromatin organization GO:0006325 IEA
    regulation of signal transduction GO:0009966 IBA
    regulation of transcription elongation by RNA polymerase II GO:0034243 IBA
    regulation of transcription elongation by RNA polymerase II GO:0034243 ISS
    negative regulation of canonical NF-kappaB signal transduction GO:0043124 IMP
    negative regulation of DNA-templated transcription GO:0045892 TAS
    negative regulation of JNK cascade GO:0046329 IMP
    defense response to virus GO:0051607 IDA
    negative regulation of extrinsic apoptotic signaling pathway GO:2001237 IMP
Subcellular Localization
    nucleus GO:0005634 IBA
    nucleus GO:0005634 IDA
    nucleoplasm GO:0005654 IDA
    chromosome GO:0005694 IEA
 Experiment description of studies that identified ZMYND11 in sEVs
1
Experiment ID 235
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
 Protein-protein interactions for ZMYND11
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Kif19a  
Affinity Capture-MS Mus musculus
2 BYRF1  
Co-crystal Structure
Protein-peptide
Affinity Capture-Western
Protein-peptide
Co-crystal Structure
Reconstituted Complex
3 LSM14B 149986
Affinity Capture-MS Homo sapiens
4 WDR82 80335
Affinity Capture-MS Homo sapiens
5 PDLIM7 9260
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
6 SRRM1 10250
Affinity Capture-MS Homo sapiens
7 GOT2 2806
Affinity Capture-MS Homo sapiens
8 FAU 2197
Affinity Capture-MS Homo sapiens
9 SPOP  
Affinity Capture-Western Homo sapiens
10 TRAF2 7186
Affinity Capture-Western Homo sapiens
11 SMARCA2 6595
Affinity Capture-Western Homo sapiens
12 H3F3A 3020
Protein-peptide Homo sapiens
Reconstituted Complex Homo sapiens
Co-crystal Structure Homo sapiens
13 TP53 7157
Affinity Capture-Western Homo sapiens
14 ZHX1  
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
15 LTBR 4055
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
16 LMP1 3783750
Affinity Capture-Western
17 SRSF4 6429
Affinity Capture-MS Homo sapiens
18 RNU5A-1 26831
Affinity Capture-RNA Homo sapiens
19 SRSF1 6426
Affinity Capture-MS Homo sapiens
20 G3BP1 10146
Affinity Capture-MS Homo sapiens
21 SAP18 10284
Affinity Capture-MS Homo sapiens
22 RNU6-1  
Affinity Capture-RNA Homo sapiens
23 TRAF6 7189
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
24 RPL10 6134
Affinity Capture-MS Homo sapiens
25 TRADD 8717
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
26 DCAF13 25879
Affinity Capture-MS Homo sapiens
27 TAB1 10454
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
28 BMPR1A 657
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
29 HDAC1 3065
Affinity Capture-Western Homo sapiens
30 SNRNP200 23020
Affinity Capture-MS Homo sapiens
31 ELAVL1 1994
Affinity Capture-RNA Homo sapiens
32 EZH1  
Affinity Capture-Western Homo sapiens
33 TRAF3 7187
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
34 HIST3H3 8290
Protein-peptide Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Protein-peptide Homo sapiens
Reconstituted Complex Homo sapiens
35 PNN 5411
Affinity Capture-MS Homo sapiens
36 HOXD4  
Two-hybrid Homo sapiens
37 MAGEC2  
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
38 GBA 2629
Affinity Capture-MS Homo sapiens
39 EFTUD2 9343
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
40 CDK2 1017
Affinity Capture-MS Homo sapiens
41 Ppp2ca 19052
Affinity Capture-MS Mus musculus
42 UBE2I 7329
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
43 MEPCE 56257
Affinity Capture-MS Homo sapiens
44 PPIG 9360
Affinity Capture-MS Homo sapiens
45 NCOR1  
Affinity Capture-Western Homo sapiens
46 PABPC1 26986
Affinity Capture-MS Homo sapiens
47 CREB5 9586
Affinity Capture-MS Homo sapiens
48 C11orf30  
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
49 ETS2  
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
50 EP400  
Affinity Capture-Western Homo sapiens
51 SMAD3 4088
Two-hybrid Homo sapiens
52 TRAF5  
Affinity Capture-Western Homo sapiens
53 PRPF8 10594
Affinity Capture-MS Homo sapiens
54 PIAS1 8554
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
55 SRSF10 10772
Affinity Capture-MS Homo sapiens
56 RNU4-1 26835
Affinity Capture-RNA Homo sapiens
57 E2F6 1876
Affinity Capture-Western Homo sapiens
58 SMAD2 4087
Two-hybrid Homo sapiens
59 MAGOHB 55110
Affinity Capture-MS Homo sapiens
60 EZH2  
Affinity Capture-Western Homo sapiens
61 SRRM2 23524
Affinity Capture-MS Homo sapiens
62 ZMYND11 10771
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Co-crystal Structure Homo sapiens
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Co-crystal Structure Homo sapiens
63 BRPF3  
Affinity Capture-MS Homo sapiens
64 DYNLL2 140735
Affinity Capture-MS Homo sapiens
65 MRPL22  
Affinity Capture-MS Homo sapiens
66 MYB  
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
67 Set 56086
Affinity Capture-MS Mus musculus
68 DYNLL1 8655
Affinity Capture-MS Homo sapiens
69 SRPK1 6732
Biochemical Activity Homo sapiens
70 TRAF1 7185
Affinity Capture-Western Homo sapiens
71 RPL29 6159
Affinity Capture-MS Homo sapiens
View the network image/svg+xml
 Pathways in which ZMYND11 is involved
No pathways found





Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here