Gene description for NMD3
Gene name NMD3 ribosome export adaptor
Gene symbol NMD3
Other names/aliases CGI-07
Species Homo sapiens
 Database cross references - NMD3
ExoCarta ExoCarta_51068
Vesiclepedia VP_51068
Entrez Gene 51068
HGNC 24250
MIM 611021
UniProt Q96D46  
 NMD3 identified in sEVs derived from the following tissue/cell type
Thymus 23844026    
 Gene ontology annotations for NMD3
Molecular Function
    RNA binding GO:0003723 HDA
    protein-macromolecule adaptor activity GO:0030674 IDA
    ribosomal large subunit binding GO:0043023 IBA
    ribosomal large subunit binding GO:0043023 IDA
    ribosomal large subunit binding GO:0043023 IPI
Biological Process
    ribosomal large subunit export from nucleus GO:0000055 IBA
    ribosomal large subunit export from nucleus GO:0000055 IMP
    protein transport GO:0015031 IEA
    positive regulation of protein binding GO:0032092 IMP
    positive regulation of RNA biosynthetic process GO:1902680 IMP
    positive regulation of protein localization to nucleolus GO:1904751 IMP
Subcellular Localization
    nucleus GO:0005634 IBA
    nucleoplasm GO:0005654 IDA
    nucleolus GO:0005730 IDA
    cytoplasm GO:0005737 IBA
    cytoplasm GO:0005737 IDA
    membrane GO:0016020 HDA
 Experiment description of studies that identified NMD3 in sEVs
1
Experiment ID 217
MISEV standards
EM
Biophysical techniques
TSG101|CD81|CD9|CD63
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors "Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for NMD3
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 CBS 875
Co-fractionation Homo sapiens
2 SGSH 6448
Affinity Capture-MS Homo sapiens
3 ARHGAP1 392
Co-fractionation Homo sapiens
4 NOP58 51602
Co-fractionation Homo sapiens
5 MAT2A 4144
Co-fractionation Homo sapiens
6 VAPA 9218
Affinity Capture-MS Homo sapiens
7 RIT1 6016
Negative Genetic Homo sapiens
8 PFKP 5214
Co-fractionation Homo sapiens
9 MID1IP1  
Affinity Capture-MS Homo sapiens
10 SDAD1  
Co-fractionation Homo sapiens
11 UBA1 7317
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
12 NTNG1  
Affinity Capture-MS Homo sapiens
13 CSNK2A1 1457
Biochemical Activity Homo sapiens
14 TRMT6 51605
Co-fractionation Homo sapiens
15 ANKRD39  
Affinity Capture-MS Homo sapiens
16 HMMR  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
17 DTX3  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
18 GFPT1 2673
Co-fractionation Homo sapiens
19 CIAPIN1 57019
Co-fractionation Homo sapiens
20 TLN1 7094
Co-fractionation Homo sapiens
21 FAM83D 81610
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
22 IMPDH2 3615
Co-fractionation Homo sapiens
23 GDI1 2664
Co-fractionation Homo sapiens
24 SLC31A1 1317
Affinity Capture-MS Homo sapiens
25 PRPS1 5631
Co-fractionation Homo sapiens
26 GSTT2B 653689
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
27 WIF1 11197
Affinity Capture-MS Homo sapiens
28 CTPS1 1503
Co-fractionation Homo sapiens
29 CPEB1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
30 GARS 2617
Co-fractionation Homo sapiens
31 HSPBP1 23640
Co-fractionation Homo sapiens
32 SFTA2  
Affinity Capture-MS Homo sapiens
33 SRP9 6726
Affinity Capture-MS Homo sapiens
34 RAD23B 5887
Co-fractionation Homo sapiens
35 MAPK3 5595
Co-fractionation Homo sapiens
36 SPX  
Affinity Capture-MS Homo sapiens
37 ZNF444  
Affinity Capture-MS Homo sapiens
38 GPD1 2819
Affinity Capture-MS Homo sapiens
39 RFC5 5985
Co-fractionation Homo sapiens
40 HMGCS1 3157
Co-fractionation Homo sapiens
41 KLHDC2  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
42 PARK2  
Affinity Capture-MS Homo sapiens
43 LSM7  
Co-fractionation Homo sapiens
44 RPL5 6125
Affinity Capture-MS Homo sapiens
45 VCP 7415
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
46 DPH5 51611
Co-fractionation Homo sapiens
47 FLNB 2317
Co-fractionation Homo sapiens
48 FBXL6  
Affinity Capture-MS Homo sapiens
49 GCLC 2729
Affinity Capture-MS Homo sapiens
50 GTPBP4 23560
Co-fractionation Homo sapiens
51 GNL3L 54552
Co-fractionation Homo sapiens
52 CNBP 7555
Co-fractionation Homo sapiens
53 ST8SIA1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
54 CSTF1 1477
Co-fractionation Homo sapiens
55 MRTO4 51154
Affinity Capture-Western Homo sapiens
56 MSH2 4436
Co-fractionation Homo sapiens
57 RNF181  
Affinity Capture-MS Homo sapiens
58 XPO1 7514
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
59 EIF6 3692
Affinity Capture-MS Homo sapiens
60 CDPF1  
Affinity Capture-MS Homo sapiens
61 ZNF622 90441
Affinity Capture-MS Homo sapiens
62 WBSCR22  
Co-fractionation Homo sapiens
63 C19orf66  
Affinity Capture-MS Homo sapiens
64 CUL3 8452
Affinity Capture-MS Homo sapiens
65 PDIA3 2923
Co-fractionation Homo sapiens
66 EPRS 2058
Co-fractionation Homo sapiens
67 LARS 51520
Co-fractionation Homo sapiens
68 PUS7 54517
Co-fractionation Homo sapiens
69 PLTP 5360
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
70 DKC1 1736
Co-fractionation Homo sapiens
71 PSPC1 55269
Affinity Capture-MS Homo sapiens
72 DIS3 22894
Co-fractionation Homo sapiens
73 KRAS 3845
Negative Genetic Homo sapiens
74 HAT1 8520
Affinity Capture-MS Homo sapiens
75 AARS 16
Co-fractionation Homo sapiens
76 PUS1 80324
Co-fractionation Homo sapiens
77 RPS16 6217
Affinity Capture-MS Homo sapiens
78 ZRANB1 54764
Affinity Capture-MS Homo sapiens
79 AHSA1 10598
Co-fractionation Homo sapiens
80 CLPP 8192
Proximity Label-MS Homo sapiens
81 MRPL42  
Affinity Capture-MS Homo sapiens
82 PLEKHA4 57664
Affinity Capture-MS Homo sapiens
83 LNX2  
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
84 SCYL3 57147
Affinity Capture-MS Homo sapiens
85 RRS1 23212
Co-fractionation Homo sapiens
86 TTC27 55622
Co-fractionation Homo sapiens
87 LDLRAD1  
Affinity Capture-MS Homo sapiens
88 ASNS 440
Co-fractionation Homo sapiens
89 POLR1C 9533
Co-fractionation Homo sapiens
90 YTHDF3  
Two-hybrid Homo sapiens
91 RNF7  
Affinity Capture-MS Homo sapiens
92 C10orf88  
Affinity Capture-MS Homo sapiens
93 OTUD4  
Affinity Capture-MS Homo sapiens
94 FLNA 2316
Co-fractionation Homo sapiens
95 STAT1 6772
Co-fractionation Homo sapiens
96 SERBP1 26135
Affinity Capture-MS Homo sapiens
97 POTEF 728378
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
98 ZNF423  
Affinity Capture-MS Homo sapiens
99 EP300 2033
Affinity Capture-MS Homo sapiens
View the network image/svg+xml
 Pathways in which NMD3 is involved
No pathways found





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