Gene description for FANCM
Gene name Fanconi anemia, complementation group M
Gene symbol FANCM
Other names/aliases FAAP250
KIAA1596
Species Homo sapiens
 Database cross references - FANCM
ExoCarta ExoCarta_57697
Vesiclepedia VP_57697
Entrez Gene 57697
HGNC 23168
MIM 609644
UniProt Q8IYD8  
 FANCM identified in sEVs derived from the following tissue/cell type
Urine 21595033    
Urine 21595033    
Urine 21595033    
 Gene ontology annotations for FANCM
Molecular Function
    four-way junction DNA binding GO:0000400 IBA
    chromatin binding GO:0003682 IDA
    DNA clamp loader activity GO:0003689 IEA
    RNA helicase activity GO:0003724 IEA
    nuclease activity GO:0004518 IEA
    protein binding GO:0005515 IPI
    ATP binding GO:0005524 IEA
    four-way junction helicase activity GO:0009378 IBA
    ATP hydrolysis activity GO:0016887 IEA
    3'-5' DNA helicase activity GO:0043138 IBA
    cohesin loader activity GO:0061775 IEA
    chromatin extrusion motor activity GO:0140584 IEA
    ATP-dependent H3-H4 histone complex chaperone activity GO:0140665 IEA
    ATP-dependent H2AZ histone chaperone activity GO:0140849 IEA
Biological Process
    resolution of meiotic recombination intermediates GO:0000712 IMP
    chromatin remodeling GO:0006338 IEA
    replication fork processing GO:0031297 IMP
    DNA duplex unwinding GO:0032508 IEA
    interstrand cross-link repair GO:0036297 IBA
    interstrand cross-link repair GO:0036297 IDA
    double-strand break repair via synthesis-dependent strand annealing GO:0045003 IBA
    chromatin looping GO:0140588 IEA
    positive regulation of protein monoubiquitination GO:1902527 IMP
Subcellular Localization
    chromatin GO:0000785 IDA
    nucleoplasm GO:0005654 IDA
    nucleoplasm GO:0005654 TAS
    cytosol GO:0005829 TAS
    Fanconi anaemia nuclear complex GO:0043240 IDA
    FANCM-MHF complex GO:0071821 IDA
    FANCM-MHF complex GO:0071821 IPI
 Experiment description of studies that identified FANCM in sEVs
1
Experiment ID 193
MISEV standards
✔ Biophysical techniques
✔ Enriched markers
✔ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 21595033    
Organism Homo sapiens
Experiment description Proteomic analysis of urinary exosomes from patients of early IgA nephropathy and thin basement membrane nephropathy.
Authors "Moon PG, Lee JE, You S, Kim TK, Cho JH, Kim IS, Kwon TH, Kim CD, Park SH, Hwang D, Kim YL, Baek MC."
Journal name Proteomics
Publication year 2011
Sample Urine
Sample name Urine - Normal
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
2
Experiment ID 194
MISEV standards
✘ Biophysical techniques
✘ Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 21595033    
Organism Homo sapiens
Experiment description Proteomic analysis of urinary exosomes from patients of early IgA nephropathy and thin basement membrane nephropathy.
Authors "Moon PG, Lee JE, You S, Kim TK, Cho JH, Kim IS, Kwon TH, Kim CD, Park SH, Hwang D, Kim YL, Baek MC."
Journal name Proteomics
Publication year 2011
Sample Urine
Sample name Urine - Patients of basement membrane nephropathy
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
3
Experiment ID 195
MISEV standards
✘ Biophysical techniques
✘ Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 21595033    
Organism Homo sapiens
Experiment description Proteomic analysis of urinary exosomes from patients of early IgA nephropathy and thin basement membrane nephropathy.
Authors "Moon PG, Lee JE, You S, Kim TK, Cho JH, Kim IS, Kwon TH, Kim CD, Park SH, Hwang D, Kim YL, Baek MC."
Journal name Proteomics
Publication year 2011
Sample Urine
Sample name Urine - Patients of early IgA nephropathy
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for FANCM
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 BLM 641
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
2 FOXF1 2294
Affinity Capture-Western Homo sapiens
3 RMI2  
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
4 MOCS2  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
5 BTRC 8945
Affinity Capture-Western Homo sapiens
6 FBXW11  
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
7 KIZ  
Affinity Capture-MS Homo sapiens
8 MAD2L1 4085
Affinity Capture-MS Homo sapiens
9 FANCD2  
Affinity Capture-MS Homo sapiens
10 SORT1 6272
Affinity Capture-MS Homo sapiens
11 FANCC 2176
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
12 PCNA 5111
Affinity Capture-MS Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Co-localization Homo sapiens
Affinity Capture-MS Homo sapiens
13 HIST1H4A 8359
Affinity Capture-MS Homo sapiens
14 KIFC3 3801
Affinity Capture-MS Homo sapiens
15 ECT2 1894
Two-hybrid Homo sapiens
16 Foxf1  
Affinity Capture-Western Mus musculus
17 RPA2 6118
Affinity Capture-MS Homo sapiens
18 CLK2 1196
Affinity Capture-Western Homo sapiens
19 FANCL 55120
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Co-localization Homo sapiens
20 CDKN2AIP  
Affinity Capture-MS Homo sapiens
21 STRA13  
Affinity Capture-Western Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
22 EME2 197342
Reconstituted Complex Homo sapiens
23 C1orf86  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
24 PRDM1  
Affinity Capture-MS Homo sapiens
25 PCIF1 63935
Affinity Capture-MS Homo sapiens
26 FANCB  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
27 FANCI 55215
Affinity Capture-Western Homo sapiens
28 RMI1  
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
Reconstituted Complex Homo sapiens
29 FUS 2521
Affinity Capture-MS Homo sapiens
30 Sass6  
Affinity Capture-MS Mus musculus
31 PRSS1 5644
Affinity Capture-MS Homo sapiens
32 Ppp2ca 19052
Affinity Capture-MS Mus musculus
33 APP 351
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
34 KIAA0101  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
35 C19orf40  
Co-fractionation Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Co-crystal Structure Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Co-localization Homo sapiens
Reconstituted Complex Homo sapiens
Co-purification Homo sapiens
Co-crystal Structure Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
36 FANCE  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
37 FANCM 57697
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
38 FANCA  
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
39 UBE2I 7329
Biochemical Activity Homo sapiens
40 APITD1  
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Co-localization Homo sapiens
Reconstituted Complex Homo sapiens
Co-fractionation Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
41 MOV10 4343
Affinity Capture-RNA Homo sapiens
42 TUBA1B 10376
Affinity Capture-MS Homo sapiens
43 FANCG 2189
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
44 TOP3A  
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
45 FANCF  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
46 INO80  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
47 TRIM27  
Two-hybrid Homo sapiens
48 C17orf70  
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
49 ANP32B 10541
Affinity Capture-MS Homo sapiens
50 Cep85l  
Affinity Capture-MS Mus musculus
51 Ufl1  
Affinity Capture-MS Mus musculus
52 RPA1 6117
Affinity Capture-MS Homo sapiens
53 TNRC6A 27327
Affinity Capture-MS Homo sapiens
54 DCD 117159
Affinity Capture-MS Homo sapiens
55 DPYSL3 1809
Affinity Capture-MS Homo sapiens
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