Gene description for TTC39A
Gene name
tetratricopeptide repeat domain 39A
Gene symbol
TTC39A
Other names/aliases
C1orf34 DEME-6
Species
Homo sapiens
Database cross references - TTC39A
ExoCarta
ExoCarta_22996
Vesiclepedia
VP_22996
Entrez Gene
22996
HGNC
18657
UniProt
Q5SRH9
TTC39A identified in sEVs derived from the following tissue/cell type
Urine
21595033
Urine
21595033
Urine
21595033
Gene ontology annotations for TTC39A
Experiment description of studies that identified TTC39A in sEVs
1
Experiment ID
193
MISEV standards
✔
EM
Biophysical techniques
✔
CD63|CD9
Enriched markers
✔
PHB
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
21595033
Organism
Homo sapiens
Experiment description
Proteomic analysis of urinary exosomes from patients of early IgA nephropathy and thin basement membrane nephropathy.
Authors
"Moon PG, Lee JE, You S, Kim TK, Cho JH, Kim IS, Kwon TH, Kim CD, Park SH, Hwang D, Kim YL, Baek MC."
Journal name
Proteomics
Publication year
2011
Sample
Urine
Sample name
Urine - Normal
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
2
Experiment ID
194
MISEV standards
✘
Biophysical techniques
✘
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
21595033
Organism
Homo sapiens
Experiment description
Proteomic analysis of urinary exosomes from patients of early IgA nephropathy and thin basement membrane nephropathy.
Authors
"Moon PG, Lee JE, You S, Kim TK, Cho JH, Kim IS, Kwon TH, Kim CD, Park SH, Hwang D, Kim YL, Baek MC."
Journal name
Proteomics
Publication year
2011
Sample
Urine
Sample name
Urine - Patients of basement membrane nephropathy
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
3
Experiment ID
195
MISEV standards
✘
Biophysical techniques
✘
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
21595033
Organism
Homo sapiens
Experiment description
Proteomic analysis of urinary exosomes from patients of early IgA nephropathy and thin basement membrane nephropathy.
Authors
"Moon PG, Lee JE, You S, Kim TK, Cho JH, Kim IS, Kwon TH, Kim CD, Park SH, Hwang D, Kim YL, Baek MC."
Journal name
Proteomics
Publication year
2011
Sample
Urine
Sample name
Urine - Patients of early IgA nephropathy
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for TTC39A
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
BRD1
23774
Affinity Capture-MS
Homo sapiens
2
GYPA
Affinity Capture-MS
Homo sapiens
3
METTL18
Affinity Capture-MS
Homo sapiens
4
P2RY12
64805
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
5
C5AR1
Affinity Capture-MS
Homo sapiens
6
LMNA
4000
Affinity Capture-MS
Homo sapiens
7
CARS
833
Co-fractionation
Homo sapiens
8
HARS
3035
Co-fractionation
Homo sapiens
9
ACKR2
Affinity Capture-MS
Homo sapiens
10
S100A9
6280
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which TTC39A is involved
No pathways found