Experiment description of studies that identified FAM208B in sEVs

1 Experiment ID 226 MISEV standards ✔ EM Biophysical techniques ✔ GAPDH|CD9|FLOT1 Enriched markers ✔ LMNA|H2AFX|ATP5A1|TOMM20 Negative markers ✘ Particle analysis Identified molecule mRNA Identification method Small RNA sequencing (Illumina HiSeq 2000 (Solexa) PubMed ID 26027894     Organism Homo sapiens Experiment description "Quantitative and qualitative analysis of small RNAs in human endothelial cells and exosomes provides insights into localized RNA processing, degradation and sorting" Authors "Bas W. M. van Balkom, Almut S. Eisele, D. Michiel Pegtel, Sander Bervoets, Marianne C. Verhaar" Journal name Journal of Extracellular Vesicles Publication year 2015 Sample Endothelial cells Sample name HMEC-1 Isolation/purification methods Differential ultracentrifugation Sucrose density gradient Flotation density 1.10 g/mL Molecules identified in the study miRNA Protein snoRNA lncRNA yRNA snRNA mRNA ncRNA mtRNA vtRNA scaRNA lincRNA Methods used in the study Small RNA sequencing (Illumina HiSeq 2000 (Solexa) Western blotting

2 Experiment ID 63 MISEV standards ✘ Biophysical techniques ✔ AQP2 Enriched markers ✘ Negative markers ✘ Particle analysis Identified molecule protein Identification method Mass spectrometry PubMed ID 19056867     Organism Homo sapiens Experiment description Large-scale proteomics and phosphoproteomics of urinary exosomes. Authors "Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta R, Wang NS, Knepper MA" Journal name JASN Publication year 2009 Sample Urine Sample name Urine - Normal Isolation/purification methods Differential centrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Mass spectrometry [LTQ] Western blotting

Protein-protein interactions for FAM208B

Protein Interactor ExoCarta ID Identification method PubMed Species 1 MORN3   Two-hybrid Homo sapiens 2 PIH1D2   Two-hybrid Homo sapiens 3 PNMA1 9240 Two-hybrid Homo sapiens 4 PRKAR1B   Two-hybrid Homo sapiens 5 COX5B 1329 Two-hybrid Homo sapiens Two-hybrid Homo sapiens 6 SIRT6   Affinity Capture-MS Homo sapiens 7 Erh   Affinity Capture-MS Mus musculus 8 MDFI   Two-hybrid Homo sapiens 9 TSEN15 116461 Two-hybrid Homo sapiens 10 KCTD9   Two-hybrid Homo sapiens Two-hybrid Homo sapiens 11 FAM208B 54906 Two-hybrid Homo sapiens Two-hybrid Homo sapiens Two-hybrid Homo sapiens Two-hybrid Homo sapiens 12 ERH 2079 Two-hybrid Homo sapiens Two-hybrid Homo sapiens Two-hybrid Homo sapiens Affinity Capture-MS Homo sapiens 13 SIRT7   Affinity Capture-MS Homo sapiens 14 SCAMP1 9522 Two-hybrid Homo sapiens 15 ZNF200   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 16 POLR1C 9533 Two-hybrid Homo sapiens 17 LONRF1   Two-hybrid Homo sapiens 18 GPSM1 26086 Two-hybrid Homo sapiens 19 MKRN3   Two-hybrid Homo sapiens 20 NEK6 10783 Two-hybrid Homo sapiens Two-hybrid Homo sapiens 21 TSGA10IP   Affinity Capture-MS Homo sapiens 22 MFAP4 4239 Affinity Capture-MS Homo sapiens 23 CUL3 8452 Affinity Capture-MS Homo sapiens 24 KIFC3 3801 Two-hybrid Homo sapiens 25 THRAP3 9967 Affinity Capture-MS Homo sapiens 26 RFC5 5985 Two-hybrid Homo sapiens 27 MLH1 4292 Two-hybrid Homo sapiens 28 ATRIP   Two-hybrid Homo sapiens 29 E2F4   Affinity Capture-MS Homo sapiens 30 IRF2 3660 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 31 KLHL40   Two-hybrid Homo sapiens Two-hybrid Homo sapiens 32 DUSP16   Affinity Capture-MS Homo sapiens 33 CCDC33 80125 Two-hybrid Homo sapiens 34 Taf15   Affinity Capture-MS Mus musculus 35 TRIM42   Two-hybrid Homo sapiens 36 CUL9   Affinity Capture-MS Homo sapiens 37 PPP1R16B   Two-hybrid Homo sapiens 38 ARMC7   Two-hybrid Homo sapiens 39 DHX40   Proximity Label-MS Homo sapiens 40 NCAPH2   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 41 TRIM73   Two-hybrid Homo sapiens 42 Srsf1 110809 Affinity Capture-MS Mus musculus 43 BHLHB9 80823 Two-hybrid Homo sapiens 44 MEOX2   Two-hybrid Homo sapiens 45 NCL 4691 Cross-Linking-MS (XL-MS) Homo sapiens 46 CARD9 64170 Two-hybrid Homo sapiens Two-hybrid Homo sapiens 47 TRIM23 373 Two-hybrid Homo sapiens 48 HNRNPLL 92906 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 49 FBF1   Two-hybrid Homo sapiens 50 Rhoa 11848 Affinity Capture-MS Mus musculus 51 CCDC85B   Two-hybrid Homo sapiens 52 ASF1A 25842 Proximity Label-MS Homo sapiens 53 MPHOSPH8 54737 Affinity Capture-MS Homo sapiens 54 L3MBTL1   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 55 LDOC1   Two-hybrid Homo sapiens Two-hybrid Homo sapiens 56 CTNNA3   Two-hybrid Homo sapiens 57 ZNF597   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 58 PACRGL   Two-hybrid Homo sapiens 59 USHBP1   Two-hybrid Homo sapiens 60 LMO1   Two-hybrid Homo sapiens 61 PRKAB2 5565 Two-hybrid Homo sapiens Two-hybrid Homo sapiens 62 OBSL1 23363 Affinity Capture-MS Homo sapiens 63 HSF2BP   Two-hybrid Homo sapiens 64 SIN3B   Affinity Capture-MS Homo sapiens 65 PRMT1 3276 Affinity Capture-MS Homo sapiens 66 PIK3R3 8503 Two-hybrid Homo sapiens 67 CCNG2   Two-hybrid Homo sapiens 68 SERTAD3   Two-hybrid Homo sapiens 69 DAXX   Affinity Capture-MS Homo sapiens 70 NFX1   Affinity Capture-MS Homo sapiens 71 C6orf165   Two-hybrid Homo sapiens 72 C1orf109   Two-hybrid Homo sapiens 73 EIF4B 1975 Cross-Linking-MS (XL-MS) Homo sapiens View the network

Pathways in which FAM208B is involved

No pathways found