Gene description for Lef1
Gene name lymphoid enhancer binding factor 1
Gene symbol Lef1
Other names/aliases 3000002B05
AI451430
Lef-1
Species Mus musculus
 Database cross references - Lef1
ExoCarta ExoCarta_16842
Vesiclepedia VP_16842
Entrez Gene 16842
UniProt P27782  
 Lef1 identified in sEVs derived from the following tissue/cell type
Mast cells 17486113    
 Gene ontology annotations for Lef1
Molecular Function
    transcription cis-regulatory region binding GO:0000976 IDA
    RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000977 ISO
    RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000978 IBA
    RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000978 IDA
    DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981 IBA
    DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981 IGI
    cis-regulatory region sequence-specific DNA binding GO:0000987 IDA
    transcription corepressor binding GO:0001222 IEA
    transcription corepressor binding GO:0001222 ISO
    DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001227 IMP
    DNA-binding transcription activator activity, RNA polymerase II-specific GO:0001228 IDA
    DNA-binding transcription activator activity, RNA polymerase II-specific GO:0001228 ISO
    nucleic acid binding GO:0003676 EXP
    DNA binding GO:0003677 IDA
    chromatin binding GO:0003682 IDA
    DNA-binding transcription factor activity GO:0003700 IDA
    DNA-binding transcription factor activity GO:0003700 ISO
    protein binding GO:0005515 IPI
    beta-catenin binding GO:0008013 IEA
    beta-catenin binding GO:0008013 ISO
    transcription factor binding GO:0008134 IPI
    DNA binding, bending GO:0008301 EXP
    DNA binding, bending GO:0008301 IDA
    nuclear estrogen receptor binding GO:0030331 IEA
    nuclear estrogen receptor binding GO:0030331 ISO
    histone binding GO:0042393 ISO
    histone deacetylase binding GO:0042826 IEA
    histone deacetylase binding GO:0042826 ISO
    sequence-specific DNA binding GO:0043565 IDA
    sequence-specific DNA binding GO:0043565 ISO
    gamma-catenin binding GO:0045295 IEA
    gamma-catenin binding GO:0045295 ISO
    armadillo repeat domain binding GO:0070016 IEA
    armadillo repeat domain binding GO:0070016 ISO
    C2H2 zinc finger domain binding GO:0070742 IEA
    C2H2 zinc finger domain binding GO:0070742 ISO
    transcription regulator inhibitor activity GO:0140416 IEA
    sequence-specific double-stranded DNA binding GO:1990837 ISO
Biological Process
    negative regulation of transcription by RNA polymerase II GO:0000122 IDA
    negative regulation of transcription by RNA polymerase II GO:0000122 ISO
    branching involved in blood vessel morphogenesis GO:0001569 IMP
    osteoblast differentiation GO:0001649 IEA
    somitogenesis GO:0001756 IGI
    somitogenesis GO:0001756 IMP
    epithelial to mesenchymal transition GO:0001837 IMP
    vasculature development GO:0001944 IMP
    sprouting angiogenesis GO:0002040 IMP
    regulation of DNA-templated transcription GO:0006355 IMP
    regulation of transcription by RNA polymerase II GO:0006357 IBA
    regulation of transcription by RNA polymerase II GO:0006357 IDA
    transcription by RNA polymerase II GO:0006366 IMP
    positive regulation of gene expression GO:0010628 IEA
    positive regulation of gene expression GO:0010628 ISO
    positive regulation of epithelial to mesenchymal transition GO:0010718 IEA
    positive regulation of epithelial to mesenchymal transition GO:0010718 ISO
    dentate gyrus development GO:0021542 IMP
    hippocampus development GO:0021766 IMP
    forebrain radial glial cell differentiation GO:0021861 IGI
    forebrain neuroblast division GO:0021873 IGI
    formation of radial glial scaffolds GO:0021943 IGI
    regulation of cell-cell adhesion GO:0022407 IMP
    regulation of Wnt signaling pathway GO:0030111 IGI
    positive regulation of Wnt signaling pathway GO:0030177 IMP
    neutrophil differentiation GO:0030223 IEA
    neutrophil differentiation GO:0030223 ISO
    embryonic limb morphogenesis GO:0030326 IGI
    positive regulation of cell migration GO:0030335 IEA
    positive regulation of cell migration GO:0030335 ISO
    BMP signaling pathway GO:0030509 IDA
    positive regulation of granulocyte differentiation GO:0030854 IEA
    positive regulation of granulocyte differentiation GO:0030854 ISO
    mammary gland development GO:0030879 IMP
    negative regulation of interleukin-13 production GO:0032696 IEA
    negative regulation of interleukin-13 production GO:0032696 ISO
    negative regulation of interleukin-4 production GO:0032713 IEA
    negative regulation of interleukin-4 production GO:0032713 ISO
    negative regulation of interleukin-5 production GO:0032714 IEA
    negative regulation of interleukin-5 production GO:0032714 ISO
    T cell receptor V(D)J recombination GO:0033153 IGI
    B cell proliferation GO:0042100 IMP
    odontogenesis of dentin-containing tooth GO:0042475 IGI
    odontogenesis of dentin-containing tooth GO:0042475 IMP
    negative regulation of apoptotic process GO:0043066 ISO
    negative regulation of DNA binding GO:0043392 ISO
    tongue development GO:0043586 IMP
    positive regulation by host of viral transcription GO:0043923 IEA
    positive regulation by host of viral transcription GO:0043923 ISO
    T-helper 1 cell differentiation GO:0045063 IDA
    positive regulation of gamma-delta T cell differentiation GO:0045588 IMP
    positive regulation of cell differentiation GO:0045597 NAS
    negative regulation of striated muscle tissue development GO:0045843 IDA
    negative regulation of DNA-templated transcription GO:0045892 IDA
    negative regulation of DNA-templated transcription GO:0045892 ISO
    positive regulation of DNA-templated transcription GO:0045893 IDA
    positive regulation of DNA-templated transcription GO:0045893 IMP
    positive regulation of DNA-templated transcription GO:0045893 ISO
    positive regulation of transcription by RNA polymerase II GO:0045944 IDA
    positive regulation of transcription by RNA polymerase II GO:0045944 IDA
    positive regulation of transcription by RNA polymerase II GO:0045944 IGI
    positive regulation of transcription by RNA polymerase II GO:0045944 IGI
    positive regulation of transcription by RNA polymerase II GO:0045944 IMP
    positive regulation of transcription by RNA polymerase II GO:0045944 ISO
    alpha-beta T cell differentiation GO:0046632 IGI
    paraxial mesoderm formation GO:0048341 IGI
    cell development GO:0048468 IGI
    regulation of neurogenesis GO:0050767 NAS
    sensory perception of taste GO:0050909 IMP
    anatomical structure regression GO:0060033 IMP
    canonical Wnt signaling pathway GO:0060070 IBA
    canonical Wnt signaling pathway GO:0060070 IDA
    canonical Wnt signaling pathway GO:0060070 IGI
    canonical Wnt signaling pathway GO:0060070 IMP
    canonical Wnt signaling pathway GO:0060070 ISO
    face morphogenesis GO:0060325 IGI
    cell chemotaxis GO:0060326 IEA
    cell chemotaxis GO:0060326 ISO
    apoptotic process involved in morphogenesis GO:0060561 IMP
    chorio-allantoic fusion GO:0060710 IGI
    trachea gland development GO:0061153 IMP
    secondary palate development GO:0062009 IMP
    protein localization to chromatin GO:0071168 IEA
    protein localization to chromatin GO:0071168 ISO
    cellular response to cytokine stimulus GO:0071345 ISO
    cellular response to interleukin-4 GO:0071353 IEA
    cellular response to interleukin-4 GO:0071353 ISO
    positive regulation of cell proliferation in bone marrow GO:0071864 IEA
    positive regulation of cell proliferation in bone marrow GO:0071864 ISO
    negative regulation of apoptotic process in bone marrow cell GO:0071866 IEA
    negative regulation of apoptotic process in bone marrow cell GO:0071866 ISO
    odontoblast differentiation GO:0071895 ISO
    positive regulation of cell cycle process GO:0090068 ISO
    positive regulation of odontoblast differentiation GO:1901331 IMP
    apoptotic process involved in blood vessel morphogenesis GO:1902262 IMP
    positive regulation of chondrocyte proliferation GO:1902732 IMP
    epithelial cell apoptotic process GO:1904019 IMP
Subcellular Localization
    chromatin GO:0000785 IBA
    nucleus GO:0005634 IDA
    nucleus GO:0005634 IPI
    nucleus GO:0005634 ISO
    nucleoplasm GO:0005654 TAS
    transcription regulator complex GO:0005667 IDA
    transcription regulator complex GO:0005667 IPI
    transcription regulator complex GO:0005667 ISO
    cytoplasm GO:0005737 IDA
    cytoplasm GO:0005737 ISO
    protein-DNA complex GO:0032993 IEA
    protein-DNA complex GO:0032993 ISO
    RNA polymerase II transcription regulator complex GO:0090575 IPI
    beta-catenin-TCF complex GO:1990907 IBA
    beta-catenin-TCF complex GO:1990907 IDA
    beta-catenin-TCF complex GO:1990907 ISO
 Experiment description of studies that identified Lef1 in sEVs
1
Experiment ID 15
MISEV standards
EM
Biophysical techniques
CD63
Enriched markers
Negative markers
Particle analysis
Identified molecule mrna
Identification method Microarray
PubMed ID 17486113    
Organism Mus musculus
Homo sapiens
Experiment description Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.
Authors "Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO"
Journal name NCB
Publication year 2007
Sample Mast cells
Sample name MC9
Bone marrow-derived mast cells
HMC-1
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.11-1.21 g/mL
Molecules identified in the study Protein
mRNA
miRNA
Methods used in the study Mass spectrometry [MALDI TOF]
Western blotting
Microarray
miRCURY LNA Array
 Protein-protein interactions for Lef1
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Myb  
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
2 Pias4  
Two-hybrid Mus musculus
3 Smad4 17128
Affinity Capture-Western Mus musculus
Synthetic Growth Defect Mus musculus
Affinity Capture-Western Mus musculus
4 Prop1  
Phenotypic Suppression Mus musculus
5 Pax3  
Reconstituted Complex Mus musculus
Affinity Capture-Western Mus musculus
Reconstituted Complex Mus musculus
Affinity Capture-Western Mus musculus
6 Tcf7l2  
Affinity Capture-Western Mus musculus
7 Pax5  
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
8 Smad2  
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
9 Tdg 21665
Affinity Capture-Western Mus musculus
Two-hybrid Mus musculus
Reconstituted Complex Mus musculus
10 Tcf7  
Affinity Capture-Western Mus musculus
11 Zbtb7b  
Affinity Capture-MS Mus musculus
12 Ctnnb1 12387
Phenotypic Suppression Mus musculus
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
Co-localization Mus musculus
Reconstituted Complex Mus musculus
13 Esr1  
Affinity Capture-Western Mus musculus
14 Tle4  
Reconstituted Complex Mus musculus
15 Hmgb2 97165
Reconstituted Complex Mus musculus
Reconstituted Complex Mus musculus
16 Axin2  
Phenotypic Suppression Mus musculus
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