Gene description for Phb
Gene name prohibitin
Gene symbol Phb
Other names/aliases Bap32
Species Mus musculus
 Database cross references - Phb
ExoCarta ExoCarta_18673
Vesiclepedia VP_18673
Entrez Gene 18673
UniProt P67778  
 Phb identified in sEVs derived from the following tissue/cell type
Melanoma cells 34957415    
Melanoma cells 34957415    
Pancreatic cells 19351151    
 Gene ontology annotations for Phb
Molecular Function
    complement component C3a binding GO:0001850 IEA
    complement component C3a binding GO:0001850 ISO
    complement component C3b binding GO:0001851 IEA
    complement component C3b binding GO:0001851 ISO
    transcription corepressor activity GO:0003714 IDA
    transcription corepressor activity GO:0003714 ISO
    protein binding GO:0005515 IPI
    enzyme binding GO:0019899 ISO
    proteinase activated receptor binding GO:0031871 IEA
    proteinase activated receptor binding GO:0031871 ISO
    histone deacetylase binding GO:0042826 IEA
    histone deacetylase binding GO:0042826 ISO
    protein heterodimerization activity GO:0046982 IEA
    protein heterodimerization activity GO:0046982 ISO
Biological Process
    negative regulation of transcription by RNA polymerase II GO:0000122 IDA
    negative regulation of transcription by RNA polymerase II GO:0000122 ISO
    ovarian follicle development GO:0001541 IEA
    ovarian follicle atresia GO:0001552 IEA
    positive regulation of immunoglobulin production GO:0002639 IDA
    regulation of DNA-templated transcription GO:0006355 ISO
    mitochondrion organization GO:0007005 IBA
    mitochondrion organization GO:0007005 ISO
    mitochondrion organization GO:0007005 NAS
    negative regulation of cell population proliferation GO:0008285 IEA
    negative regulation of cell population proliferation GO:0008285 ISO
    response to xenobiotic stimulus GO:0009410 IEA
    positive regulation of gene expression GO:0010628 ISO
    negative regulation of gene expression GO:0010629 IEA
    negative regulation of gene expression GO:0010629 ISO
    negative regulation of transcription by competitive promoter binding GO:0010944 IEA
    negative regulation of transcription by competitive promoter binding GO:0010944 ISO
    negative regulation of cell growth GO:0030308 IEA
    negative regulation of cell growth GO:0030308 ISO
    animal organ regeneration GO:0031100 IEA
    positive regulation of interleukin-17 production GO:0032740 ISO
    positive regulation of interleukin-17 production GO:0032740 ISS
    response to immobilization stress GO:0035902 IEA
    RIG-I signaling pathway GO:0039529 IEA
    RIG-I signaling pathway GO:0039529 ISO
    epigenetic regulation of gene expression GO:0040029 IEA
    epigenetic regulation of gene expression GO:0040029 ISO
    B cell activation GO:0042113 IDA
    negative regulation of protein catabolic process GO:0042177 IEA
    negative regulation of protein catabolic process GO:0042177 ISO
    negative regulation of apoptotic process GO:0043066 IEA
    negative regulation of apoptotic process GO:0043066 ISO
    response to peptide hormone GO:0043434 IEA
    positive regulation of neuron apoptotic process GO:0043525 IEA
    positive regulation of neuron apoptotic process GO:0043525 ISO
    modulation by host of viral RNA genome replication GO:0044830 IDA
    response to ethanol GO:0045471 IEA
    positive regulation of G protein-coupled receptor signaling pathway GO:0045745 IEA
    positive regulation of G protein-coupled receptor signaling pathway GO:0045745 ISO
    negative regulation of DNA-templated transcription GO:0045892 ISO
    positive regulation of DNA-templated transcription GO:0045893 IEA
    positive regulation of DNA-templated transcription GO:0045893 ISO
    positive regulation of complement activation GO:0045917 IEA
    positive regulation of complement activation GO:0045917 ISO
    symbiont entry into host cell GO:0046718 IDA
    positive regulation of smooth muscle cell proliferation GO:0048661 ISO
    positive regulation of smooth muscle cell proliferation GO:0048661 ISS
    protein stabilization GO:0050821 ISO
    progesterone receptor signaling pathway GO:0050847 IEA
    progesterone receptor signaling pathway GO:0050847 ISO
    positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0051897 ISO
    positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0051897 ISS
    negative regulation of androgen receptor signaling pathway GO:0060766 IEA
    negative regulation of androgen receptor signaling pathway GO:0060766 ISO
    negative regulation of ERK1 and ERK2 cascade GO:0070373 IEA
    negative regulation of ERK1 and ERK2 cascade GO:0070373 ISO
    positive regulation of ERK1 and ERK2 cascade GO:0070374 IEA
    positive regulation of ERK1 and ERK2 cascade GO:0070374 ISO
    cellular response to interleukin-6 GO:0071354 IEA
    cellular response to interleukin-6 GO:0071354 ISO
    DNA biosynthetic process GO:0071897 IMP
    T-helper 17 type immune response GO:0072538 ISO
    T-helper 17 type immune response GO:0072538 ISS
    antiviral innate immune response GO:0140374 IEA
    antiviral innate immune response GO:0140374 ISO
    positive regulation of non-canonical NF-kappaB signal transduction GO:1901224 IDA
    negative regulation of glucocorticoid receptor signaling pathway GO:2000323 IEA
    negative regulation of glucocorticoid receptor signaling pathway GO:2000323 ISO
Subcellular Localization
    nucleus GO:0005634 IDA
    nucleus GO:0005634 ISO
    nucleoplasm GO:0005654 IEA
    nucleoplasm GO:0005654 ISO
    cytoplasm GO:0005737 IDA
    cytoplasm GO:0005737 ISO
    mitochondrion GO:0005739 HDA
    mitochondrion GO:0005739 IBA
    mitochondrion GO:0005739 IDA
    mitochondrion GO:0005739 ISO
    mitochondrial outer membrane GO:0005741 IEA
    mitochondrial outer membrane GO:0005741 ISO
    mitochondrial inner membrane GO:0005743 HDA
    mitochondrial inner membrane GO:0005743 IDA
    mitochondrial inner membrane GO:0005743 ISO
    early endosome GO:0005769 IEA
    early endosome GO:0005769 ISO
    plasma membrane GO:0005886 IDA
    plasma membrane GO:0005886 ISO
    cell surface GO:0009986 IDA
    cell surface GO:0009986 ISO
    cell surface GO:0009986 ISS
    postsynaptic density GO:0014069 IEA
    postsynaptic density GO:0014069 ISO
    mitochondrial prohibitin complex GO:0035632 IPI
    mitochondrial prohibitin complex GO:0035632 ISO
    mitochondrial prohibitin complex GO:0035632 ISS
    myelin sheath GO:0043209 HDA
    synapse GO:0045202 ISO
    extrinsic component of presynaptic active zone membrane GO:0098891 IEA
    extrinsic component of presynaptic active zone membrane GO:0098891 ISO
    glutamatergic synapse GO:0098978 IEA
    glutamatergic synapse GO:0098978 ISO
    GABA-ergic synapse GO:0098982 IEA
    GABA-ergic synapse GO:0098982 ISO
 Experiment description of studies that identified Phb in sEVs
1
Experiment ID 1117
MISEV standards
Biophysical techniques
Cd81|Icam1
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 34957415    
Organism Mus musculus
Experiment description Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism
Authors "García-Silva S, Benito-Martín A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÁ, Torres-Ruiz R, Rodríguez-Perales S, Martínez L, Pérez-Martínez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, Martínez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, Megías D, Mehrara BJ, Lyden D, Peinado H."
Journal name Nat Cancer
Publication year 2021
Sample Melanoma cells
Sample name B16-F1R2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
2
Experiment ID 1118
MISEV standards
Biophysical techniques
Cd81|Icam1
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 34957415    
Organism Mus musculus
Experiment description Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism
Authors "García-Silva S, Benito-Martín A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÁ, Torres-Ruiz R, Rodríguez-Perales S, Martínez L, Pérez-Martínez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, Martínez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, Megías D, Mehrara BJ, Lyden D, Peinado H."
Journal name Nat Cancer
Publication year 2021
Sample Melanoma cells
Sample name B16-F1R2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
3
Experiment ID 188
MISEV standards
EM
Biophysical techniques
GAPDH|UCHL1|HSP90
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 19351151    
Organism Mus musculus
Experiment description Characterization of vesicles secreted from insulinoma NIT-1 cells.
Authors "Lee HS, Jeong J, Lee KJ."
Journal name J Proteome Res
Publication year 2009
Sample Pancreatic cells
Sample name Pancreatic beta cell (NIT-1)
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for Phb
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Phb2 12034
Cross-Linking-MS (XL-MS) Mus musculus
Cross-Linking-MS (XL-MS) Mus musculus
Cross-Linking-MS (XL-MS) Mus musculus
Cross-Linking-MS (XL-MS) Mus musculus
2 Mettl21e  
Affinity Capture-MS Mus musculus
3 SNCA 6622
Affinity Capture-MS Homo sapiens
4 Atxn1  
Proximity Label-MS Mus musculus
5 Eed  
Affinity Capture-MS Mus musculus
6 Tfe3  
Affinity Capture-MS Mus musculus
7 Mapt  
Affinity Capture-MS Mus musculus
8 Atg16l1  
Affinity Capture-MS Mus musculus
9 Phb 18673
Cross-Linking-MS (XL-MS) Mus musculus
Cross-Linking-MS (XL-MS) Mus musculus
10 Hspb2 69253
Affinity Capture-MS Mus musculus
11 Tia1  
Affinity Capture-MS Mus musculus
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