Gene description for Csde1
Gene name cold shock domain containing E1, RNA binding
Gene symbol Csde1
Other names/aliases AA960392
BC016898
D3Jfr1
mKIAA0885
unr
Species Mus musculus
 Database cross references - Csde1
ExoCarta ExoCarta_229663
Entrez Gene 229663
UniProt Q91W50  
 Csde1 identified in exosomes derived from the following tissue/cell type
Mast cells 17486113    
 Gene ontology annotations for Csde1
Molecular Function
    DNA binding GO:0003677 IEA
    poly(A) RNA binding GO:0044822 ISO
    nucleic acid binding GO:0003676 IEA
    RNA binding GO:0003723 IEA
Biological Process
    regulation of transcription, DNA-templated GO:0006355 IEA
    nuclear-transcribed mRNA catabolic process, no-go decay GO:0070966 ISO
Subcellular Localization
    CRD-mediated mRNA stability complex GO:0070937 ISO
    plasma membrane GO:0005886 ISO
    cytoplasm GO:0005737 ISO
    mitochondrial inner membrane GO:0005743 IDA
    Golgi apparatus GO:0005794 ISO
 Experiment description of studies that identified Csde1 in exosomes
1
Experiment ID 15
ISEV standards
EM
EV Biophysical techniques
EV Cytosolic markers
CD63
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule mrna
Identification method Microarray
PubMed ID 17486113    
Organism Mus musculus
Homo sapiens
Experiment description Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.
Authors Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO
Journal name NCB
Publication year 2007
Sample Mast cells
Sample name MC9
Bone marrow-derived mast cells
HMC-1
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.11-1.21 g/mL
Molecules identified in the study Protein
mRNA
miRNA
Methods used in the study Mass spectrometry [MALDI TOF]
Western blotting
Microarray
miRCURY LNA Array
 Protein-protein interactions for Csde1
  Protein Interactor ExoCarta ID Identification method PubMed Species
No interactions are found.
 Pathways in which Csde1 is involved
No pathways found





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