Gene description for Rps9
Gene name ribosomal protein S9
Gene symbol Rps9
Other names/aliases 3010033P07Rik
AL022771
AL022885
Species Mus musculus
 Database cross references - Rps9
ExoCarta ExoCarta_76846
Vesiclepedia VP_76846
Entrez Gene 76846
UniProt Q6ZWN5  
 Rps9 identified in sEVs derived from the following tissue/cell type
Colon cancer cells 37309723    
T-cell lymphoma cells 37309723    
 Gene ontology annotations for Rps9
Molecular Function
    structural constituent of ribosome GO:0003735 IBA
    structural constituent of ribosome GO:0003735 IDA
    structural constituent of ribosome GO:0003735 ISO
    rRNA binding GO:0019843 IBA
    translation regulator activity GO:0045182 IEA
    translation regulator activity GO:0045182 ISO
    5.8S rRNA binding GO:1990932 IEA
    5.8S rRNA binding GO:1990932 ISO
Biological Process
    cytoplasmic translation GO:0002181 NAS
    translation GO:0006412 ISO
    regulation of translation GO:0006417 IEA
    positive regulation of cell population proliferation GO:0008284 IEA
    positive regulation of cell population proliferation GO:0008284 ISO
    ribosomal small subunit biogenesis GO:0042274 IBA
    ribosomal small subunit biogenesis GO:0042274 ISO
    ribosomal small subunit biogenesis GO:0042274 ISS
Subcellular Localization
    nucleolus GO:0005730 IEA
    nucleolus GO:0005730 ISO
    cytoplasm GO:0005737 ISO
    cytoplasm GO:0005737 NAS
    cytosol GO:0005829 TAS
    ribosome GO:0005840 NAS
    cytosolic ribosome GO:0022626 ISO
    cytosolic small ribosomal subunit GO:0022627 IBA
    cytosolic small ribosomal subunit GO:0022627 IDA
    cytosolic small ribosomal subunit GO:0022627 ISO
    cytosolic small ribosomal subunit GO:0022627 NAS
    small-subunit processome GO:0032040 ISO
    small-subunit processome GO:0032040 ISS
    synapse GO:0045202 EXP
    synapse GO:0045202 IDA
    postsynapse GO:0098794 NAS
    ribonucleoprotein complex GO:1990904 ISO
    ribonucleoprotein complex GO:1990904 ISS
 Experiment description of studies that identified Rps9 in sEVs
1
Experiment ID 907
MISEV standards
✔ Biophysical techniques
✔ Enriched markers
✔ Negative markers
✔ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 37309723    
Organism Mus musculus
Experiment description Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells
Authors "Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S."
Journal name Proteomics
Publication year 2023
Sample Colon cancer cells
Sample name C26
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
2
Experiment ID 908
MISEV standards
✔ Biophysical techniques
✔ Enriched markers
✔ Negative markers
✔ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 37309723    
Organism Mus musculus
Experiment description Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells
Authors "Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S."
Journal name Proteomics
Publication year 2023
Sample T-cell lymphoma cells
Sample name EL4
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
 Protein-protein interactions for Rps9
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Rps27a 78294
Co-fractionation Mus musculus
2 Rpl11 67025
Co-fractionation Mus musculus
3 Dhx29  
Co-fractionation Mus musculus
4 Rplp0 11837
Co-fractionation Mus musculus
5 Ncbp1 433702
Co-fractionation Mus musculus
6 Eif3a 13669
Co-fractionation Mus musculus
7 Eprs 107508
Co-fractionation Mus musculus
8 Fancd2  
Affinity Capture-MS Mus musculus
9 Rps10 67097
Co-fractionation Mus musculus
10 Rpl13a 22121
Co-fractionation Mus musculus
11 Hspa8 15481
Co-fractionation Mus musculus
12 Fus  
Co-fractionation Mus musculus
13 Rplp2 67186
Co-fractionation Mus musculus
14 Rps4x 20102
Co-fractionation Mus musculus
15 Rpl14 67115
Co-fractionation Mus musculus
16 Rps2 16898
Co-fractionation Mus musculus
17 Kctd13  
Affinity Capture-MS Mus musculus
18 Rps8 20116
Co-fractionation Mus musculus
19 Rps23 66475
Co-fractionation Mus musculus
20 Rpl7a 27176
Co-fractionation Mus musculus
21 Pde12  
Co-fractionation Mus musculus
22 Rpl27 19942
Co-fractionation Mus musculus
23 Ybx1 22608
Co-fractionation Mus musculus
24 Fmr1  
Co-fractionation Mus musculus
25 Wibg  
Co-fractionation Mus musculus
26 Rpl6 19988
Co-fractionation Mus musculus
27 Cebpa  
Affinity Capture-MS Mus musculus
28 Thrb  
Affinity Capture-MS Mus musculus
29 Rpl24 68193
Co-fractionation Mus musculus
30 Rps6 20104
Co-fractionation Mus musculus
31 Hnrnpab 15384
Co-fractionation Mus musculus
32 Rpl31 114641
Co-fractionation Mus musculus
33 Rpl13 270106
Co-fractionation Mus musculus
34 Rps7 20115
Co-fractionation Mus musculus
35 Rpl22 19934
Co-fractionation Mus musculus
36 Mettl21e  
Affinity Capture-MS Mus musculus
37 Rpl4 67891
Co-fractionation Mus musculus
38 Tmem173  
Proximity Label-MS Mus musculus
39 Fzr1  
Affinity Capture-MS Mus musculus
40 Hnrnpd 11991
Co-fractionation Mus musculus
41 Pabpc1 18458
Co-fractionation Mus musculus
42 Rps20 67427
Co-fractionation Mus musculus
43 Raver1  
Co-fractionation Mus musculus
44 Rpl26 19941
Co-fractionation Mus musculus
45 Rpl12 269261
Co-fractionation Mus musculus
46 Rpl18 19899
Co-fractionation Mus musculus
47 Rps9 76846
Cross-Linking-MS (XL-MS) Mus musculus
Cross-Linking-MS (XL-MS) Mus musculus
48 Ddx3x 13205
Co-fractionation Mus musculus
49 Rps21 66481
Co-fractionation Mus musculus
50 Rpl7 19989
Co-fractionation Mus musculus
51 Rps15a 267019
Co-fractionation Mus musculus
52 Rps28 54127
Co-fractionation Mus musculus
53 Gnb2l1 14694
Co-fractionation Mus musculus
54 Syncrip 56403
Co-fractionation Mus musculus
55 Rpl35 66489
Co-fractionation Mus musculus
56 Rps3a1 20091
Co-fractionation Mus musculus
57 Snd1 56463
Co-fractionation Mus musculus
58 Rps13 68052
Co-fractionation Mus musculus
59 Hba 15121
Co-fractionation Mus musculus
60 Dhx9 13211
Co-fractionation Mus musculus
61 Rpl23a 268449
Co-fractionation Mus musculus
62 Rps14 20044
Co-fractionation Mus musculus
63 Ilf3 16201
Co-fractionation Mus musculus
64 Rpl30 19946
Co-fractionation Mus musculus
65 Eed  
Affinity Capture-MS Mus musculus
66 Rpsa 16785
Co-fractionation Mus musculus
67 Eef1b2 55949
Co-fractionation Mus musculus
68 Rps16 20055
Co-fractionation Mus musculus
69 Hnrnpa2b1 53379
Co-fractionation Mus musculus
70 Rpl8 26961
Co-fractionation Mus musculus
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